Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is yeiJ [C]

Identifier: 157960463

GI number: 157960463

Start: 785435

End: 786661

Strand: Direct

Name: yeiJ [C]

Synonym: Spea_0634

Alternate gene names: 157960463

Gene position: 785435-786661 (Clockwise)

Preceding gene: 157960462

Following gene: 157960464

Centisome position: 15.18

GC content: 47.84

Gene sequence:

>1227_bases
ATGGAAGTTTTCATCAGTTTGTTCGGCATGCTTTGTCTTATGGGCTTAGCGGTTGCACTATCAGAAAATAGAAAAGCAAT
TAATCCTAGAACCGTACTCGGTGCGTTAGCATTTCAAGTCGCCTTTGGTGCATTTGTTATGTATGTGCCTATGGGGCAGG
CGGTGCTTGATGGCGCATCAAATGGCGTGATGCACGTTATTGGTTACGCTAACGAAGGCTTAGCTTTCTTGTTTGGTGAC
CTCGCGAAGTTTGGTGTTGGCTTTATCTTTGTGATTAACGTGCTATTTGTGGTGGTCTTCATCAGCGCATTAATCGCCGT
ACTTTATTACCTTGGCATCATGCAGTTGGTTATTGGCCTGATTGGTGGCGGCTTATCTAAGCTACTGGGTTCAAGCCGTG
CAGAATCGCTATCTGCGACAGCCAATATCTTTGTTGGCCCAATTGAAGCCCCTTCAATGGTACGTCCCTTTGTTAAGCAC
ATGACTCGCTCTGAGCTATTCGCAGTAATGACTGGTGGTTTGGCATCAGTTGCGGGTGGCACCATGATTGGTTACATCCA
GATGGGGGTTGACGTTAAATACGTGCTAACCGCCGCCTTTATGACGGCGCCTGCGGGCCTGCTATTTGCTAAGTTGATGT
GGCCAGAAACTGAAACGCCACAAAACGACATCAAGAAAGTGATGGACGATGTGGCAGACAAACCAGCAAACGTACTCGAC
GCAGCAGCCAGCGGCGCAGCTATGGGAATGCAGCAAGTATTGTCAGTGTCTGCGTTGCTATTAGCATTCGTGGCTCTTAT
CGCCATGGTTAACGGTATGCTTGGCGGCATCGGCGGCTGGTTTGGTATTGAAGACCTGACGATGCAGGCTATCTTAGGTT
ATATCTTGGCACCACTTGCTTGGGTGATGGGTGTACCTTGGAGCGAAGCGACTCAGGCTGCTTCATTTATCGGCCAGAAG
ATGGTGATCAATGAATTTGTAGCCTATATAGACTTCTTAAAAGTATCCGACCAGCTATCAGAAAAGACCCAAATTATCAT
CAGTTTTGCCCTGTGTGGCTTCGCTAACATCGGCTCATTAGCCATGGTGATTGGTGGTTTAGCGGCGCTTTGCCCTGAAC
GTCGTCACGACTTAAGTGCACTAGGTATGAAGGCGTTAATAGCTGCTGCTCTAGCTAACTTAATGAGCGGTACCATTGCA
GGCTTACTTTATAGCTTAGCGGGTTAA

Upstream 100 bases:

>100_bases
AAAACTTTGTTTATCTTCGCCAAAAACAGCCAAATCCCTTGCGACAAAATTGCGTCTGTATACACTGCGCTCATATCAAG
ACTTTAACGGTAATAAATGT

Downstream 100 bases:

>100_bases
TTTTCCCATAAGCTTAGTTTGAAATCGTAGTATTTTTTATAAGAGTACTTGTTTACTAGCGCAAACAAGTACTCAACTTT
TTAAGGAAGTATCATGACTC

Product: Na+ dependent nucleoside transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD
LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH
MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD
AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK
MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA
GLLYSLAG

Sequences:

>Translated_408_residues
MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD
LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH
MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD
AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK
MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA
GLLYSLAG
>Mature_408_residues
MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGASNGVMHVIGYANEGLAFLFGD
LAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGLIGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKH
MTRSELFAVMTGGLASVAGGTMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD
AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLAWVMGVPWSEATQAASFIGQK
MVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSLAMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIA
GLLYSLAG

Specific function: Unknown

COG id: COG1972

COG function: function code F; Nucleoside permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]

Homologues:

Organism=Homo sapiens, GI11545853, Length=365, Percent_Identity=39.1780821917808, Blast_Score=259, Evalue=2e-69,
Organism=Homo sapiens, GI227116277, Length=418, Percent_Identity=33.9712918660287, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI42542381, Length=418, Percent_Identity=33.2535885167464, Blast_Score=245, Evalue=5e-65,
Organism=Escherichia coli, GI1788485, Length=417, Percent_Identity=45.5635491606715, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1788488, Length=417, Percent_Identity=45.3237410071942, Blast_Score=320, Evalue=1e-88,
Organism=Escherichia coli, GI1788737, Length=389, Percent_Identity=31.3624678663239, Blast_Score=186, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=31.9306930693069, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71991794, Length=399, Percent_Identity=31.328320802005, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI25146537, Length=202, Percent_Identity=31.6831683168317, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI45552519, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI45552517, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI19921868, Length=399, Percent_Identity=35.3383458646617, Blast_Score=243, Evalue=1e-64,
Organism=Drosophila melanogaster, GI281360430, Length=404, Percent_Identity=34.1584158415842, Blast_Score=221, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008276
- InterPro:   IPR018270
- InterPro:   IPR011642
- InterPro:   IPR011657
- InterPro:   IPR002668 [H]

Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]

EC number: NA

Molecular weight: Translated: 42726; Mature: 42726

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGAS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
NGVMHVIGYANEGLAFLFGDLAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKHMTRSELFAVMTGGLASVAGG
HCCCHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
TMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD
HHEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH
AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WVMGVPWSEATQAASFIGQKMVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIAGLLYSLAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEVFISLFGMLCLMGLAVALSENRKAINPRTVLGALAFQVAFGAFVMYVPMGQAVLDGAS
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
NGVMHVIGYANEGLAFLFGDLAKFGVGFIFVINVLFVVVFISALIAVLYYLGIMQLVIGL
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGGGLSKLLGSSRAESLSATANIFVGPIEAPSMVRPFVKHMTRSELFAVMTGGLASVAGG
HCCCHHHHHCCHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCC
TMIGYIQMGVDVKYVLTAAFMTAPAGLLFAKLMWPETETPQNDIKKVMDDVADKPANVLD
HHEEHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHH
AAASGAAMGMQQVLSVSALLLAFVALIAMVNGMLGGIGGWFGIEDLTMQAILGYILAPLA
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WVMGVPWSEATQAASFIGQKMVINEFVAYIDFLKVSDQLSEKTQIIISFALCGFANIGSL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
AMVIGGLAALCPERRHDLSALGMKALIAAALANLMSGTIAGLLYSLAG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]