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The map label for this gene is yjdF [H]

Identifier: 157960461

GI number: 157960461

Start: 783222

End: 783836

Strand: Direct

Name: yjdF [H]

Synonym: Spea_0632

Alternate gene names: 157960461

Gene position: 783222-783836 (Clockwise)

Preceding gene: 157960458

Following gene: 157960462

Centisome position: 15.14

GC content: 46.83

Gene sequence:

>615_bases
TTGAATAAAAGAGCTGCTTGGCTAGTGATATTCTTCGCTGTCTTGATCTGGTCAGGGATAAATCCTAAAGATCAATTTAC
CTGGTTTTTAGAGGTGGCACCGGCGTTAATTGCCCTGCCTATTTTAATCTACACCCGTAATAGCTTCACTCTGACCAGTT
TAGCTTATGGTTTGATCTTGATTCACTGCATTATCTTGATGGTGGGCGGGCATTACACCTATGCCGAAGTACCGCTGTTC
GATTGGATTAGCGATTGGACCGGAGGCGAGCGTAACAACTACGACAAGGTCGGGCACTTTGCCCAAGGCTTTATTCCGAC
TATTTTGGCGCGCGAGGTGTTTATTCGCTTGAGTGTGGTTAAAGTCGGCGCTTGGTGTAACTTCTTAGCTATCTGTTTTG
CTTTAGCATTCTCTGCTTTTTACGAACTCATTGAATGGTGGGTTGCGGAGCTTACAGGCGAAGATGCAGAGGCATTTTTA
GGCACCCAAGGCTATGTGTGGGACACGCAATCGGATATGGCTATGGCGTTAGTTGGGGCGATTTCGGCAGTCCTTCTCCT
CAGTCGTTTGCATGATAAGGCACTGAGGGAAAAGCTTAATCTCGCCAAGCTATGA

Upstream 100 bases:

>100_bases
AGAGGTAACAAAGTAGCACTTTTTTTTGAGGCTGTGGAGGGCTAGATGGCTAAAGTGTTTATTCTGAATTTAGAACAATA
TCTTATATGGGGGAGATATT

Downstream 100 bases:

>100_bases
TAAGCTTGCTGACCATAGGAATAACGACCTTAGTCTAGGTCGATATGCGCCATTTTTCAGAGTAAACGAGACACAACAAG
TATCTCCTAGCACGAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNKRAAWLVIFFAVLIWSGINPKDQFTWFLEVAPALIALPILIYTRNSFTLTSLAYGLILIHCIILMVGGHYTYAEVPLF
DWISDWTGGERNNYDKVGHFAQGFIPTILAREVFIRLSVVKVGAWCNFLAICFALAFSAFYELIEWWVAELTGEDAEAFL
GTQGYVWDTQSDMAMALVGAISAVLLLSRLHDKALREKLNLAKL

Sequences:

>Translated_204_residues
MNKRAAWLVIFFAVLIWSGINPKDQFTWFLEVAPALIALPILIYTRNSFTLTSLAYGLILIHCIILMVGGHYTYAEVPLF
DWISDWTGGERNNYDKVGHFAQGFIPTILAREVFIRLSVVKVGAWCNFLAICFALAFSAFYELIEWWVAELTGEDAEAFL
GTQGYVWDTQSDMAMALVGAISAVLLLSRLHDKALREKLNLAKL
>Mature_204_residues
MNKRAAWLVIFFAVLIWSGINPKDQFTWFLEVAPALIALPILIYTRNSFTLTSLAYGLILIHCIILMVGGHYTYAEVPLF
DWISDWTGGERNNYDKVGHFAQGFIPTILAREVFIRLSVVKVGAWCNFLAICFALAFSAFYELIEWWVAELTGEDAEAFL
GTQGYVWDTQSDMAMALVGAISAVLLLSRLHDKALREKLNLAKL

Specific function: Unknown

COG id: COG3647

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790562, Length=184, Percent_Identity=50, Blast_Score=193, Evalue=6e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014509 [H]

Pfam domain/function: PF09997 DUF2238 [H]

EC number: NA

Molecular weight: Translated: 23001; Mature: 23001

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRAAWLVIFFAVLIWSGINPKDQFTWFLEVAPALIALPILIYTRNSFTLTSLAYGLIL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IHCIILMVGGHYTYAEVPLFDWISDWTGGERNNYDKVGHFAQGFIPTILAREVFIRLSVV
HHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGAWCNFLAICFALAFSAFYELIEWWVAELTGEDAEAFLGTQGYVWDTQSDMAMALVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCHHHHHHHHHH
ISAVLLLSRLHDKALREKLNLAKL
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKRAAWLVIFFAVLIWSGINPKDQFTWFLEVAPALIALPILIYTRNSFTLTSLAYGLIL
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IHCIILMVGGHYTYAEVPLFDWISDWTGGERNNYDKVGHFAQGFIPTILAREVFIRLSVV
HHHHHHHHCCCCCEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVGAWCNFLAICFALAFSAFYELIEWWVAELTGEDAEAFLGTQGYVWDTQSDMAMALVGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEECCCHHHHHHHHHH
ISAVLLLSRLHDKALREKLNLAKL
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2656658 [H]