Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960374

Identifier: 157960374

GI number: 157960374

Start: 671034

End: 671570

Strand: Reverse

Name: 157960374

Synonym: Spea_0545

Alternate gene names: NA

Gene position: 671570-671034 (Counterclockwise)

Preceding gene: 157960375

Following gene: 157960373

Centisome position: 12.98

GC content: 42.27

Gene sequence:

>537_bases
ATGCGCTTTATTTTATTACTCACTAGCTTGCTTAGCCCTATGGCGTTTGCAGCCATTACACCGGATGCTTTACAGCAGGT
AAAAGCTGTGCAGTTTAGTAGTAACAAGGTAATAACGGCAGGCTTGCCAACGCAACCTCAATTCAAAGTACTTAAAGATT
CTGGTGTAGAACTAGTGATTAACTTAATCCCAAAAGATAATCCTACTGGTTATGCCAATGAAGCAGAGCTAGTTAAACAA
GCTGGCATGGACTACGAGCAAATTGATGTGGACTGGAAACAGCCTACTGTTGCAAATGTTCAACAGTTTTTTGCCATAAT
GGACGCTAACCAAGACAAAGATATTTTAGTGCACTGCGCAGCCAACTTCCGCGCATCGGCATTTTATTATCTGTATCAGT
TAAAACGCGGCCAAAGCGACTCATTGGCTTACCAACAACAAGTCATGGCACCATGGGGAGAGCTTTCAAAAAGCTTAAAA
GAGTATCCCCAATGGCAGGTACTTATTGATCAGGTGAAGTCTGACATAGACCAATAG

Upstream 100 bases:

>100_bases
GTCTAGGTATTAAGACTAACTATTTGTTCTGCTTCTTGAACTTATGCCTTGTGAGTCACTCTTATACAAGTTGATAATGA
GTACACAAAAGGAAACCAAG

Downstream 100 bases:

>100_bases
CGCTTGGTTTGCCAAGCTCGCCACCTTCTTCTAAAAAGCGCCTAGATGGGCGTTTTTTTTATGTTAATTGACATTCTCTC
TCTTCCTTAATCCACACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MRFILLLTSLLSPMAFAAITPDALQQVKAVQFSSNKVITAGLPTQPQFKVLKDSGVELVINLIPKDNPTGYANEAELVKQ
AGMDYEQIDVDWKQPTVANVQQFFAIMDANQDKDILVHCAANFRASAFYYLYQLKRGQSDSLAYQQQVMAPWGELSKSLK
EYPQWQVLIDQVKSDIDQ

Sequences:

>Translated_178_residues
MRFILLLTSLLSPMAFAAITPDALQQVKAVQFSSNKVITAGLPTQPQFKVLKDSGVELVINLIPKDNPTGYANEAELVKQ
AGMDYEQIDVDWKQPTVANVQQFFAIMDANQDKDILVHCAANFRASAFYYLYQLKRGQSDSLAYQQQVMAPWGELSKSLK
EYPQWQVLIDQVKSDIDQ
>Mature_178_residues
MRFILLLTSLLSPMAFAAITPDALQQVKAVQFSSNKVITAGLPTQPQFKVLKDSGVELVINLIPKDNPTGYANEAELVKQ
AGMDYEQIDVDWKQPTVANVQQFFAIMDANQDKDILVHCAANFRASAFYYLYQLKRGQSDSLAYQQQVMAPWGELSKSLK
EYPQWQVLIDQVKSDIDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20048; Mature: 20048

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFILLLTSLLSPMAFAAITPDALQQVKAVQFSSNKVITAGLPTQPQFKVLKDSGVELVI
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHEECCCCEEEEE
NLIPKDNPTGYANEAELVKQAGMDYEQIDVDWKQPTVANVQQFFAIMDANQDKDILVHCA
EECCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
ANFRASAFYYLYQLKRGQSDSLAYQQQVMAPWGELSKSLKEYPQWQVLIDQVKSDIDQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFILLLTSLLSPMAFAAITPDALQQVKAVQFSSNKVITAGLPTQPQFKVLKDSGVELVI
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCCCCHHEECCCCEEEEE
NLIPKDNPTGYANEAELVKQAGMDYEQIDVDWKQPTVANVQQFFAIMDANQDKDILVHCA
EECCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEC
ANFRASAFYYLYQLKRGQSDSLAYQQQVMAPWGELSKSLKEYPQWQVLIDQVKSDIDQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA