| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960360
Identifier: 157960360
GI number: 157960360
Start: 656197
End: 656550
Strand: Reverse
Name: 157960360
Synonym: Spea_0531
Alternate gene names: NA
Gene position: 656550-656197 (Counterclockwise)
Preceding gene: 157960361
Following gene: 157960358
Centisome position: 12.69
GC content: 42.66
Gene sequence:
>354_bases ATGCGTACTTGCCTACTCATGCTGGTTTTTTCAGTGGTATGCCTATTTATTGGCTACCACGCCTACCTGTTTATTATGCC TAGCGTAAAGGTCATTAATCAGTCAGGACAATTACTGACACGAGTCGAAGTCAGCCTGCCAAGCAATAACTTAGTATTCG ATAATATCGGCCCTAAACAGACTATGCGTATTCACCATAGCACTGATCAGTCTGATGGCGATTATGCTTACCGCATTCGT TTATCATCAGGAGCATACATTAGTGGCCGCTGTGGCAAGGTCACTAACGATCAATATATGAAGGTACTAGAGCTAACTAT CAAGAGTGATGACAGAGTCAGCTGCATTGAATAA
Upstream 100 bases:
>100_bases AAAGAACAAATAATCGCAGTGTAACTATACTTATATCAAACTAACCGATTATCAATCTGACTCTAAAATAACGGGGTTAT CTTAGTCTTTAGGAGAATGG
Downstream 100 bases:
>100_bases ACGCAACTAGAGACCAAAATCTAGAGACCAGAGACTAATCTGTCAGTAACGCTCTAATCTGTTTATAACTGGTCTGCCAA TTTTGATAATCAAGCTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRTCLLMLVFSVVCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPKQTMRIHHSTDQSDGDYAYRIR LSSGAYISGRCGKVTNDQYMKVLELTIKSDDRVSCIE
Sequences:
>Translated_117_residues MRTCLLMLVFSVVCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPKQTMRIHHSTDQSDGDYAYRIR LSSGAYISGRCGKVTNDQYMKVLELTIKSDDRVSCIE >Mature_117_residues MRTCLLMLVFSVVCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPKQTMRIHHSTDQSDGDYAYRIR LSSGAYISGRCGKVTNDQYMKVLELTIKSDDRVSCIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13227; Mature: 13227
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTCLLMLVFSVVCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPKQ CHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCC TMRIHHSTDQSDGDYAYRIRLSSGAYISGRCGKVTNDQYMKVLELTIKSDDRVSCIE EEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHEEEEEEEECCCCCEECCC >Mature Secondary Structure MRTCLLMLVFSVVCLFIGYHAYLFIMPSVKVINQSGQLLTRVEVSLPSNNLVFDNIGPKQ CHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCCCEEEEEEEECCCCCEEECCCCCCC TMRIHHSTDQSDGDYAYRIRLSSGAYISGRCGKVTNDQYMKVLELTIKSDDRVSCIE EEEEECCCCCCCCCEEEEEEECCCCEEECCCCCCCCHHHEEEEEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA