| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960357
Identifier: 157960357
GI number: 157960357
Start: 651937
End: 653757
Strand: Direct
Name: 157960357
Synonym: Spea_0528
Alternate gene names: NA
Gene position: 651937-653757 (Clockwise)
Preceding gene: 157960356
Following gene: 157960359
Centisome position: 12.6
GC content: 40.64
Gene sequence:
>1821_bases ATGAAGTTCCAACAAGTAGCTACGTTTATTGTAGCGATATCTGTGTTAGTGGGCTGTAATTCTGACTCATCTTCAGACAT TCCTTTACCACCTTCTTATTCATCAATTAATGGTCTTGCATCTCAAGGAGGGGCAATCAAAGGGGTTGTGACTCTTAAGC AAAGCGATGAATCTAGAGTTAAATCTATAAGTGATTTACAAGTATTTGAAGATGGTAAATTTGTTATCAGTGACGCTACA GAGCTTAGCTATCCTGCAATAGTTAAAATCACTGGTGCTCATGGCGTGAAAGCCACGACTGAATATTCAATTATCCTTGA TAACACTGTTGAACGTATCAATTTATCACCTCTAACTCGGTTGATGATAGGCCGTATAGCAGGAGTGGACGCAGAGGTTG TTTATGATAAATTTTCAGACTATCAACATCTTTTTACCGATGAAGCACTCGAAGAGGCGCAAAGCGAGCTAGACAGTCTT CTGGAGCCATTGTTGTCGGTTGCAAAGTTAGCAACAGACACCAACTTTTTATCGGCAGTTTATCTGGCAGATTTTGAGCA CCTTGACAGTGTGCTTTCTACTTTATCTATTGAATACCAACATGATAAAGCGACGTTGGTTTACTTGCCAGCCAAAGAGT TTCGAGTTGAATTAGCTTACGGTGAAAGCTGGAAAAATAAGTCATTTATTCCTGCTGGAAGCGATCAGGCACAGATTAAG CTGCAACTAGGCTTAATCAATCAAGCTAGCAATACTTTAGAGCAGATGATTTTGTTAAAGGACGATAGAGTCGCTTTTGA TAATTATCTTGCTCCTAATGCACACTGGTTTGGTAGTGATGCTAGTACTTTGCATGACATCTATTTTGATATTTTACCTG AAGAAGATAATGCCAATTTAAAGCGCTATCGCGATTTTGTTATTTTGGATAGCACGCCAGCAAAGCAGCAATATTTGTTA GGTTTCACTGCTACGTTTGAAGCGAGTACTCAGTCGAGTATTTCGAGAGATCAAGCTTGGTTTGAATTTGTTGACGGTGA ACTTAAGTTCCTTGGTGATGACAAGCCTTTCCCGACATCCTTTTATGCTATGTACAAGCTTAACGTCGCACCAGCAGAGT ATAACTGGGTTCCTTTTAAGACATTTGAGTGGGTATTTGAAACTACAGGTTTCTTGTCATCAACTCACTGTACGCCAGAT CTAGAGCGTGGTGCTTGGCAGCGGAATAGCAAAGAGTTTTTTGACAAGCTTGCAAACCTTAACGATGCCTTTGATGGGCT GCAATATATCACCGTTGAGTCACCAACTAGCAAATCGATTAAGTTAGATAAGATATTTAAGGAGCCAGGAAGCTCAAGCT GTCATCTTGTTGATAGTCAGAACAAAATCAGTGGTCTGTTAGATGGATATAAGATTGACCTTAATGCTGATGTGATTGAG AAAGATAAGGAGTATACGGTGACATTCGTGTATGACTCTCCAGAAAAGAACATCAGTAAAAAGATATTCCTGACGCAACC ACCAGAAGGTGAGTCCGCAATGAAGTCGTATCTGGCTGAGTTAGAAGAGGTCGATGGTTCGAAAGACTCTTTTAAATATA ACTGGAGCCGCCAAAATGACTTTGTCGCTGAAGGGGATTTATATGTTTACTTCCCAGCTCATCAAGGTTCAAGTCATCGT GTCAACATCGAGGCTGGAAAAACTGAGGTCGCAGCGCAACTAGATAATGACGTTGTGCAGATTTTTCACTCAGCCTTTGA CCCTTATGGTCGAGTGATTATGAACTACTATGTATCTGCGGATGACACTCCGCTAAAGTAG
Upstream 100 bases:
>100_bases AAGGGTTACCGATATCTAATACTGGGCAGTATTCAGACACGGTAGCCCTTTTCTGTACAAGTAACTTTAAAATATCTTCT TACTGGATAAATAATAAATC
Downstream 100 bases:
>100_bases TTTTAATACAATAACCGAGTGAGACTTAGTTTATCTCACTCGGTTATGAACACCTTTATAGAGGGCTATTTTACGCCCTC TATAAAATAGCTAGAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 606; Mature: 606
Protein sequence:
>606_residues MKFQQVATFIVAISVLVGCNSDSSSDIPLPPSYSSINGLASQGGAIKGVVTLKQSDESRVKSISDLQVFEDGKFVISDAT ELSYPAIVKITGAHGVKATTEYSIILDNTVERINLSPLTRLMIGRIAGVDAEVVYDKFSDYQHLFTDEALEEAQSELDSL LEPLLSVAKLATDTNFLSAVYLADFEHLDSVLSTLSIEYQHDKATLVYLPAKEFRVELAYGESWKNKSFIPAGSDQAQIK LQLGLINQASNTLEQMILLKDDRVAFDNYLAPNAHWFGSDASTLHDIYFDILPEEDNANLKRYRDFVILDSTPAKQQYLL GFTATFEASTQSSISRDQAWFEFVDGELKFLGDDKPFPTSFYAMYKLNVAPAEYNWVPFKTFEWVFETTGFLSSTHCTPD LERGAWQRNSKEFFDKLANLNDAFDGLQYITVESPTSKSIKLDKIFKEPGSSSCHLVDSQNKISGLLDGYKIDLNADVIE KDKEYTVTFVYDSPEKNISKKIFLTQPPEGESAMKSYLAELEEVDGSKDSFKYNWSRQNDFVAEGDLYVYFPAHQGSSHR VNIEAGKTEVAAQLDNDVVQIFHSAFDPYGRVIMNYYVSADDTPLK
Sequences:
>Translated_606_residues MKFQQVATFIVAISVLVGCNSDSSSDIPLPPSYSSINGLASQGGAIKGVVTLKQSDESRVKSISDLQVFEDGKFVISDAT ELSYPAIVKITGAHGVKATTEYSIILDNTVERINLSPLTRLMIGRIAGVDAEVVYDKFSDYQHLFTDEALEEAQSELDSL LEPLLSVAKLATDTNFLSAVYLADFEHLDSVLSTLSIEYQHDKATLVYLPAKEFRVELAYGESWKNKSFIPAGSDQAQIK LQLGLINQASNTLEQMILLKDDRVAFDNYLAPNAHWFGSDASTLHDIYFDILPEEDNANLKRYRDFVILDSTPAKQQYLL GFTATFEASTQSSISRDQAWFEFVDGELKFLGDDKPFPTSFYAMYKLNVAPAEYNWVPFKTFEWVFETTGFLSSTHCTPD LERGAWQRNSKEFFDKLANLNDAFDGLQYITVESPTSKSIKLDKIFKEPGSSSCHLVDSQNKISGLLDGYKIDLNADVIE KDKEYTVTFVYDSPEKNISKKIFLTQPPEGESAMKSYLAELEEVDGSKDSFKYNWSRQNDFVAEGDLYVYFPAHQGSSHR VNIEAGKTEVAAQLDNDVVQIFHSAFDPYGRVIMNYYVSADDTPLK >Mature_606_residues MKFQQVATFIVAISVLVGCNSDSSSDIPLPPSYSSINGLASQGGAIKGVVTLKQSDESRVKSISDLQVFEDGKFVISDAT ELSYPAIVKITGAHGVKATTEYSIILDNTVERINLSPLTRLMIGRIAGVDAEVVYDKFSDYQHLFTDEALEEAQSELDSL LEPLLSVAKLATDTNFLSAVYLADFEHLDSVLSTLSIEYQHDKATLVYLPAKEFRVELAYGESWKNKSFIPAGSDQAQIK LQLGLINQASNTLEQMILLKDDRVAFDNYLAPNAHWFGSDASTLHDIYFDILPEEDNANLKRYRDFVILDSTPAKQQYLL GFTATFEASTQSSISRDQAWFEFVDGELKFLGDDKPFPTSFYAMYKLNVAPAEYNWVPFKTFEWVFETTGFLSSTHCTPD LERGAWQRNSKEFFDKLANLNDAFDGLQYITVESPTSKSIKLDKIFKEPGSSSCHLVDSQNKISGLLDGYKIDLNADVIE KDKEYTVTFVYDSPEKNISKKIFLTQPPEGESAMKSYLAELEEVDGSKDSFKYNWSRQNDFVAEGDLYVYFPAHQGSSHR VNIEAGKTEVAAQLDNDVVQIFHSAFDPYGRVIMNYYVSADDTPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67866; Mature: 67866
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQQVATFIVAISVLVGCNSDSSSDIPLPPSYSSINGLASQGGAIKGVVTLKQSDESRV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHCCCEEEEEEEEECCCHHHH KSISDLQVFEDGKFVISDATELSYPAIVKITGAHGVKATTEYSIILDNTVERINLSPLTR HHHHHCEEECCCCEEEECCCCCCCCEEEEEECCCCCEECEEEEEEECCCHHHCCCCHHHH LMIGRIAGVDAEVVYDKFSDYQHLFTDEALEEAQSELDSLLEPLLSVAKLATDTNFLSAV HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YLADFEHLDSVLSTLSIEYQHDKATLVYLPAKEFRVELAYGESWKNKSFIPAGSDQAQIK HHHHHHHHHHHHHHHEEEEECCCEEEEEECHHHEEEEEEECCCCCCCCCCCCCCCCEEEE LQLGLINQASNTLEQMILLKDDRVAFDNYLAPNAHWFGSDASTLHDIYFDILPEEDNANL EEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCHHHHEEHEEEECCCCCCCH KRYRDFVILDSTPAKQQYLLGFTATFEASTQSSISRDQAWFEFVDGELKFLGDDKPFPTS HEECEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC FYAMYKLNVAPAEYNWVPFKTFEWVFETTGFLSSTHCTPDLERGAWQRNSKEFFDKLANL EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCC NDAFDGLQYITVESPTSKSIKLDKIFKEPGSSSCHLVDSQNKISGLLDGYKIDLNADVIE CHHHCCEEEEEEECCCCCCEEHHHHHCCCCCCCEEEECCCCHHHHCCCCEEEECCCHHCC KDKEYTVTFVYDSPEKNISKKIFLTQPPEGESAMKSYLAELEEVDGSKDSFKYNWSRQND CCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC FVAEGDLYVYFPAHQGSSHRVNIEAGKTEVAAQLDNDVVQIFHSAFDPYGRVIMNYYVSA EEECCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECC DDTPLK CCCCCC >Mature Secondary Structure MKFQQVATFIVAISVLVGCNSDSSSDIPLPPSYSSINGLASQGGAIKGVVTLKQSDESRV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHCCCEEEEEEEEECCCHHHH KSISDLQVFEDGKFVISDATELSYPAIVKITGAHGVKATTEYSIILDNTVERINLSPLTR HHHHHCEEECCCCEEEECCCCCCCCEEEEEECCCCCEECEEEEEEECCCHHHCCCCHHHH LMIGRIAGVDAEVVYDKFSDYQHLFTDEALEEAQSELDSLLEPLLSVAKLATDTNFLSAV HHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH YLADFEHLDSVLSTLSIEYQHDKATLVYLPAKEFRVELAYGESWKNKSFIPAGSDQAQIK HHHHHHHHHHHHHHHEEEEECCCEEEEEECHHHEEEEEEECCCCCCCCCCCCCCCCEEEE LQLGLINQASNTLEQMILLKDDRVAFDNYLAPNAHWFGSDASTLHDIYFDILPEEDNANL EEEEECHHHHHHHHHHHEECCCCEECCCCCCCCCCCCCCCCHHHHEEHEEEECCCCCCCH KRYRDFVILDSTPAKQQYLLGFTATFEASTQSSISRDQAWFEFVDGELKFLGDDKPFPTS HEECEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCC FYAMYKLNVAPAEYNWVPFKTFEWVFETTGFLSSTHCTPDLERGAWQRNSKEFFDKLANL EEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCC NDAFDGLQYITVESPTSKSIKLDKIFKEPGSSSCHLVDSQNKISGLLDGYKIDLNADVIE CHHHCCEEEEEEECCCCCCEEHHHHHCCCCCCCEEEECCCCHHHHCCCCEEEECCCHHCC KDKEYTVTFVYDSPEKNISKKIFLTQPPEGESAMKSYLAELEEVDGSKDSFKYNWSRQND CCCCEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC FVAEGDLYVYFPAHQGSSHRVNIEAGKTEVAAQLDNDVVQIFHSAFDPYGRVIMNYYVSA EEECCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEEECC DDTPLK CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA