Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960332

Identifier: 157960332

GI number: 157960332

Start: 616645

End: 618675

Strand: Direct

Name: 157960332

Synonym: Spea_0503

Alternate gene names: NA

Gene position: 616645-618675 (Clockwise)

Preceding gene: 157960331

Following gene: 157960333

Centisome position: 11.92

GC content: 44.95

Gene sequence:

>2031_bases
ATGAGACGGTGGAAACACAAGGTAGCATTAAGCGTGCTGTTTTGTTTTGGTGCCATTGCCAATGCGAACGCTGCTGGAAA
ATACGACAGTATCCCTCAGATGGGTAAAACTGCTAAAGAGTCGATAGCTAATTATCAAGGAACGCAACAGATAAACGGCG
TGAAAACGCTGCAAGACTATATTGTTCAAGAAGATGAGTTATTTGATTACCTATTCGAAAATCACCCAATGTTTAAATAT
CAACAATCGGGTAACTTGATTGGTGATTACCATATCAGTGACCGTGGTGAAGAGTATTTAGATACGGGCCATAGCCCTGC
ATATAGTAAAAGTGTTGGTAAGCCACGAGCGGTACAATATCGTTTAGGTGCCAAATCAATTCTAGATTATCCAAACAATT
TCGTTGGTCCTGAGAAGTGTGCCGAATGTCATGCGACTCAATACGAGAAATGGCAGCGCTCGCGTCATGCTAAAACAATT
CGTTTCCCTGGCGAACACCCAGAAGTGGATAACGATATTGAAAAAACCATGTACAACACCAAAGATACCTCAATCTTACC
CGACGGTATTACCCCAGACATGATCTATGCAACTGTTGGTACGCCTCGTACTAAATACGGTTTCATCGATGCATGGCTCG
TGCGTGGTACTTACCATATCAGAGACGGTTTATTACGCGACGGCACTGGTAAAATGGTTGCTGGTGCAAACCAGTTCTCT
CGTGGTTGGGCTGAATGGCTAACCCCTGAGATGTCTAAGAAAATTAACGATGTTATCCCTGATTTCCCAATTACCCTTGA
AGGTTTTGGTGGTTCAGGTTCGCACCAGCAAGGCATGAGCTCTTATGGTGCTAAGTATGAAAAAGAGATGTTGTTCCAAC
CAGCAAGTTCTTACTGTGAAGTTTGTCATACGTTCAAGTTTGACTTCCAAAGCAAGCAAGAGTTCTTCGATGCCTTAGGC
GATCCTAAGAAGCTTCAAGAGCACACTATCTCTCGTGGTATCGCTTGTGAAGAGTGTCATGGCGCAGGTGGTCACTTAGA
TGGTGGTACTGGCGGCATGCAGTCTAACTGTGAACGTTGTCACCAGCGTTTCCAGTATGACCCAACGTTAATGGATACTC
CTGAAGCACAAGAGAAGGGTGAATACGCCTTTGGTGTGAAGATGAAGTCTCTATGTCCATCATGTGGTACTGAAGGTTCA
CAGATGTATAACTCTGTGCACTACGAGAAGGGCATGCGTTGTACTACATGTCACGATCCACACGAAGTGACGGATGGTTC
TTGGCAGTCTGGTTTCACTACACCAAAGCTGAAGAAAGACTGTAAAGATTGTCACGAAGCACAAACGTTGATTGCTGAAA
ATTCAGATACTCACAACCAGCAAACATGTCAAAGCTGTCACATGCCTAACATGGGTAGCTGTGAAAACTTCAAGGCATTG
CAGTTCCCTGACCAAGCAGGCTTCGACGCAGTACGTAAGTCTCATATGTGGAAGATTGAAGTCGACCCTACTCTGAAGAC
GTTGAACCCACCTGAAGGTGAGTCTCGTGCCGGTGGCCCAAGCGGTGTTAAAGGTTGGACAGTGGCTAAGAACGAAGAAG
GTCGCAACTACTTAGACTTGATGTGGTCTTGTGCTCGTACCTCTATCTCTGACCACGATGTGGTTGAGAACAAAGGTTGT
CACAGCCAGTTCCAGTCTGAACTAGAAAAAGGCCTACATTACGAAGATCAGTTAGAGATCTACGGTGAAGTTCAGAAGAT
GCAAACGCCTGTTAAGGAAGTCTTCACAAAGGTTGAGCAAGCACTTGTACGCATCGACCAGCTATTAGAAGTGACTAAGT
TGTCTACTGAAGACAAGACTCAAGTACTAATGCTAGCTGAGAAAGCGCAAGAGACTGTTGATCTAATCAAGAAAGATGGT
TCTTGGGGGGTTCATGGCTTCCGTTACAGCCAGAAGCGTCTAGATGCTGCACTAACGTATGTTACGCAAGCGCAAAACAT
TCTAGATGGAACAGGTTACGCAGCTAAGTAA

Upstream 100 bases:

>100_bases
TTTAGCTCAATCGGTGAACGGTTAGTTTCAAAAATGTGGGCTTAAAAAAAAAGCCTGCAATAAACAGTAAAAATAAAATA
ATGATAAGTAGGAGTGAATG

Downstream 100 bases:

>100_bases
GCCGCCTAACTTAATCGCCTCGGCCGCCATTGCAGTGCAATGACTGCCGAGGCAATAGAGAGAAAAATGATGAAAAAAGC
ACTTGGTCAAATCTTAGTAA

Product: cytochrome c

Products: NA

Alternate protein names: tRNA Synthetase Class II; Cytochrome C Family Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTQQINGVKTLQDYIVQEDELFDYLFENHPMFKY
QQSGNLIGDYHISDRGEEYLDTGHSPAYSKSVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDMIYATVGTPRTKYGFIDAWLVRGTYHIRDGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGGSGSHQQGMSSYGAKYEKEMLFQPASSYCEVCHTFKFDFQSKQEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLMDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSVHYEKGMRCTTCHDPHEVTDGSWQSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRNYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVQKMQTPVKEVFTKVEQALVRIDQLLEVTKLSTEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK

Sequences:

>Translated_676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTQQINGVKTLQDYIVQEDELFDYLFENHPMFKY
QQSGNLIGDYHISDRGEEYLDTGHSPAYSKSVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDMIYATVGTPRTKYGFIDAWLVRGTYHIRDGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGGSGSHQQGMSSYGAKYEKEMLFQPASSYCEVCHTFKFDFQSKQEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLMDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSVHYEKGMRCTTCHDPHEVTDGSWQSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRNYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVQKMQTPVKEVFTKVEQALVRIDQLLEVTKLSTEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK
>Mature_676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTQQINGVKTLQDYIVQEDELFDYLFENHPMFKY
QQSGNLIGDYHISDRGEEYLDTGHSPAYSKSVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDMIYATVGTPRTKYGFIDAWLVRGTYHIRDGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGGSGSHQQGMSSYGAKYEKEMLFQPASSYCEVCHTFKFDFQSKQEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLMDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSVHYEKGMRCTTCHDPHEVTDGSWQSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRNYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVQKMQTPVKEVFTKVEQALVRIDQLLEVTKLSTEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75944; Mature: 75944

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTQQINGVKTLQDY
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQEDELFDYLFENHPMFKYQQSGNLIGDYHISDRGEEYLDTGHSPAYSKSVGKPRAVQY
HCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCEEEE
RLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTIRFPGEHPEVDNDIEKTMYNT
ECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCC
KDTSILPDGITPDMIYATVGTPRTKYGFIDAWLVRGTYHIRDGLLRDGTGKMVAGANQFS
CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHH
RGWAEWLTPEMSKKINDVIPDFPITLEGFGGSGSHQQGMSSYGAKYEKEMLFQPASSYCE
HHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHH
VCHTFKFDFQSKQEFFDALGDPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERC
HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH
HQRFQYDPTLMDTPEAQEKGEYAFGVKMKSLCPSCGTEGSQMYNSVHYEKGMRCTTCHDP
HHHHCCCCCCCCCCCHHHCCCEEECEEHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCC
HEVTDGSWQSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEE
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRNYLDL
CCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHH
MWSCARTSISDHDVVENKGCHSQFQSELEKGLHYEDQLEIYGEVQKMQTPVKEVFTKVEQ
HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
ALVRIDQLLEVTKLSTEDKTQVLMLAEKAQETVDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGTGYAAK
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTQQINGVKTLQDY
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQEDELFDYLFENHPMFKYQQSGNLIGDYHISDRGEEYLDTGHSPAYSKSVGKPRAVQY
HCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCCHHHHHCCCCCCHHHCCCCCCEEEE
RLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTIRFPGEHPEVDNDIEKTMYNT
ECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCC
KDTSILPDGITPDMIYATVGTPRTKYGFIDAWLVRGTYHIRDGLLRDGTGKMVAGANQFS
CCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCHHHHCCCCCCCCCCEEECCCHHH
RGWAEWLTPEMSKKINDVIPDFPITLEGFGGSGSHQQGMSSYGAKYEKEMLFQPASSYCE
HHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHCCHHHHHH
VCHTFKFDFQSKQEFFDALGDPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERC
HHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH
HQRFQYDPTLMDTPEAQEKGEYAFGVKMKSLCPSCGTEGSQMYNSVHYEKGMRCTTCHDP
HHHHCCCCCCCCCCCHHHCCCEEECEEHHHHCCCCCCCHHHHHHHHHHHCCCEEECCCCC
HEVTDGSWQSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEE
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRNYLDL
CCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHH
MWSCARTSISDHDVVENKGCHSQFQSELEKGLHYEDQLEIYGEVQKMQTPVKEVFTKVEQ
HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
ALVRIDQLLEVTKLSTEDKTQVLMLAEKAQETVDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGTGYAAK
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA