| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is nrfG [C]
Identifier: 157960311
GI number: 157960311
Start: 593449
End: 594186
Strand: Direct
Name: nrfG [C]
Synonym: Spea_0482
Alternate gene names: 157960311
Gene position: 593449-594186 (Clockwise)
Preceding gene: 157960310
Following gene: 157960312
Centisome position: 11.47
GC content: 40.38
Gene sequence:
>738_bases ATGAATACATTGCTACTCAGTATTTCAGCTATCTTATTTTGTTCGTTTGCATTGCTTGTTTGCCATCACTTTAGATATGG CAGGGGCATTCAAGATCTAGAAAATGAGATTGGAGATTGTTTTGGCTCTAATTATTACGTTACCAAAAGTGACGCTAATT CAAACAATAATTACCCCTTTGGATTCATAGGACTATTTCTAATCAGCGTTACTGTTTTCCTATATTTGACGTTAGGCCGA TATCAAGACTTAGACTCAGCCATGGCTGACTACAACATTGATTATCTGCTTGTCGCCGATATCAACAAGGGACAGAAGCT TGCCGAAGAGAACCCTGCAGATCCACTAGTGTTATTAAGCTTAGCCCAGTCGTATATCGATGGTGGCTTATACAATGATG CACTCGAAACCTTAGACAAGTTGCTGATAATTAACAGCGATAACAGCGAGGCCTTAGGGTTAAAAGCGACGTCCATGTAC TACCGAGATGATCGCGTAATCAACATGGATACCTCTTTAGTGATCGCGAGGGCGCTAGCTCAACATCACGAAGAGTTTAA TACCCGCTTACTCATTGCCAATGATGCTTACCTCAATGGTGACTATCAGAAGGCAATCGATAACTGGAATATCGTGTTAA CCAATAAGGTGCAAGTGTTTAATCGTGACGCTATTAATTTCGCAATTGAAAAGTCGAAGAACAAATTAACGCAAGTTGAT GCCGATGTTGCTCATTAA
Upstream 100 bases:
>100_bases ATGGGACTAAGTGGCATGGGTATGGGTGGCATGATGGGCGGCTCTATGGGCGCCAATCCACACAATTAAATTTAATATTA ATTATTGATATAGAGCCAAG
Downstream 100 bases:
>100_bases CGCTTAAGTAAACGCCAGACAGAATATTAAATTAAAAAAATAAAGTGTCGGTTTTAAACCGATAATCGGAGGATGCTGTG AGTGAAAATCTAGAGAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Formate-Dependent Nitrite Reductase NrfG Protein; Cytochrome C Biogenesis Factor-Like Protein; Cytochrome C-Type Biogenesis Protein CcmI; Formate-Dependent Nitrite Reductase Subunit NrfG; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Domain Protein; Cytochrome C-Type Biogenesis Protein CcmH; Cytochrome C Biogenesis Protein
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNTLLLSISAILFCSFALLVCHHFRYGRGIQDLENEIGDCFGSNYYVTKSDANSNNNYPFGFIGLFLISVTVFLYLTLGR YQDLDSAMADYNIDYLLVADINKGQKLAEENPADPLVLLSLAQSYIDGGLYNDALETLDKLLIINSDNSEALGLKATSMY YRDDRVINMDTSLVIARALAQHHEEFNTRLLIANDAYLNGDYQKAIDNWNIVLTNKVQVFNRDAINFAIEKSKNKLTQVD ADVAH
Sequences:
>Translated_245_residues MNTLLLSISAILFCSFALLVCHHFRYGRGIQDLENEIGDCFGSNYYVTKSDANSNNNYPFGFIGLFLISVTVFLYLTLGR YQDLDSAMADYNIDYLLVADINKGQKLAEENPADPLVLLSLAQSYIDGGLYNDALETLDKLLIINSDNSEALGLKATSMY YRDDRVINMDTSLVIARALAQHHEEFNTRLLIANDAYLNGDYQKAIDNWNIVLTNKVQVFNRDAINFAIEKSKNKLTQVD ADVAH >Mature_245_residues MNTLLLSISAILFCSFALLVCHHFRYGRGIQDLENEIGDCFGSNYYVTKSDANSNNNYPFGFIGLFLISVTVFLYLTLGR YQDLDSAMADYNIDYLLVADINKGQKLAEENPADPLVLLSLAQSYIDGGLYNDALETLDKLLIINSDNSEALGLKATSMY YRDDRVINMDTSLVIARALAQHHEEFNTRLLIANDAYLNGDYQKAIDNWNIVLTNKVQVFNRDAINFAIEKSKNKLTQVD ADVAH
Specific function: Required For Formate-Dependent Nitrite Reduction. Not Required For The Biosynthesis Of Any Of The C-Type Cytochromes Nor For The Secretion Of The Periplasmic Cytochromes. [C]
COG id: COG4235
COG function: function code O; Cytochrome c biogenesis factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27532; Mature: 27532
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLLSISAILFCSFALLVCHHFRYGRGIQDLENEIGDCFGSNYYVTKSDANSNNNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCH GFIGLFLISVTVFLYLTLGRYQDLDSAMADYNIDYLLVADINKGQKLAEENPADPLVLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCHHHHHH LAQSYIDGGLYNDALETLDKLLIINSDNSEALGLKATSMYYRDDRVINMDTSLVIARALA HHHHHHCCCCHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEECCEEEECCHHHHHHHHHH QHHEEFNTRLLIANDAYLNGDYQKAIDNWNIVLTNKVQVFNRDAINFAIEKSKNKLTQVD HHHHHHCCEEEEEECCEECCCHHHHCCCCEEEEECEEEEECCCHHHHEEECCCCHHHHCC ADVAH CCCCC >Mature Secondary Structure MNTLLLSISAILFCSFALLVCHHFRYGRGIQDLENEIGDCFGSNYYVTKSDANSNNNYPF CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCH GFIGLFLISVTVFLYLTLGRYQDLDSAMADYNIDYLLVADINKGQKLAEENPADPLVLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCHHHHHH LAQSYIDGGLYNDALETLDKLLIINSDNSEALGLKATSMYYRDDRVINMDTSLVIARALA HHHHHHCCCCHHHHHHHHHHEEEEECCCCCEEEEEEEEEEEECCEEEECCHHHHHHHHHH QHHEEFNTRLLIANDAYLNGDYQKAIDNWNIVLTNKVQVFNRDAINFAIEKSKNKLTQVD HHHHHHCCEEEEEECCEECCCHHHHCCCCEEEEECEEEEECCCHHHHEEECCCCHHHHCC ADVAH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA