Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960290

Identifier: 157960290

GI number: 157960290

Start: 569440

End: 570192

Strand: Reverse

Name: 157960290

Synonym: Spea_0461

Alternate gene names: NA

Gene position: 570192-569440 (Counterclockwise)

Preceding gene: 157960295

Following gene: 157960288

Centisome position: 11.02

GC content: 42.9

Gene sequence:

>753_bases
ATGAACAAAAAATTACTATGTTTAGCTTTGCTAGTCAGCCCGACTGCAATGGCAGATAATATGGTTAACTGGTGGGATGT
GAGTGTCACTGGCTTATATGGTGAAAATTACGATTTAGCACCTTCAGATAAACAAACAGCAGTTACCTTTGAAACCGCTG
GTGATTGGAAATATGGCGACTGGTTTGCGTTTCAGGACGTGACTTATTTCAATGGCTCAAACGGCGGTAAAGACAATAGC
ACCTATGGCGAAATCTCAACTCGCTTCAGTGCAGGTAAAATATTAGGTAAAACCGTAGGTTTTGGCCCAGTTACCGATCT
ATCGCTAGCACTGGCTTTAGAAGAAGGTGAAGGCCCAGTCGAGAGTTTCCTATACGGTGTCGGTATGGATATTAAGATCC
CATACTTTAGCTACTTCCAGCTAAACACTTACCGTAGACACGCGATGGGCAGTGACAACATCAGTGACGGCTGGCAGTTA
ACACCATCATTTAGAATGGACTTCCCAGTTGGCAATTCAAATATCGTATTCGATGGTTACATTGACTGGGTATTTGCCAC
AGATGAAGCGAGTTATGAGACTAACTTCCACTTCAACCCACAGCTTAAGTATGACTTAGGTGCTGTCGTGCTAGGCGACC
AGCAGAAGAATAAGCTATTTGTTGGTATCGAATACGATTACTGGAAAAACAAATATGGCGTAGATGGTATGGACCAAAAC
ACCTATTCGGTGATCGCTAAATACCATTTCTAG

Upstream 100 bases:

>100_bases
TGCGCCTATATTCCCCGCCAGCAAAATAACGATTAAATGCCTATAGGTATAATTCCAATTTACTGTACCTAGAGGTCTCA
TAAAAATAAAAGGTTTTACG

Downstream 100 bases:

>100_bases
AATCGGTTTCGATTCCAATGAAAAAGGCGCTTATAGCGCCTTTTTTTATTGAACAGAACTCAAGTGAAATTGGTTATGCT
AGTAGCTTCTTAGCTGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNKKLLCLALLVSPTAMADNMVNWWDVSVTGLYGENYDLAPSDKQTAVTFETAGDWKYGDWFAFQDVTYFNGSNGGKDNS
TYGEISTRFSAGKILGKTVGFGPVTDLSLALALEEGEGPVESFLYGVGMDIKIPYFSYFQLNTYRRHAMGSDNISDGWQL
TPSFRMDFPVGNSNIVFDGYIDWVFATDEASYETNFHFNPQLKYDLGAVVLGDQQKNKLFVGIEYDYWKNKYGVDGMDQN
TYSVIAKYHF

Sequences:

>Translated_250_residues
MNKKLLCLALLVSPTAMADNMVNWWDVSVTGLYGENYDLAPSDKQTAVTFETAGDWKYGDWFAFQDVTYFNGSNGGKDNS
TYGEISTRFSAGKILGKTVGFGPVTDLSLALALEEGEGPVESFLYGVGMDIKIPYFSYFQLNTYRRHAMGSDNISDGWQL
TPSFRMDFPVGNSNIVFDGYIDWVFATDEASYETNFHFNPQLKYDLGAVVLGDQQKNKLFVGIEYDYWKNKYGVDGMDQN
TYSVIAKYHF
>Mature_250_residues
MNKKLLCLALLVSPTAMADNMVNWWDVSVTGLYGENYDLAPSDKQTAVTFETAGDWKYGDWFAFQDVTYFNGSNGGKDNS
TYGEISTRFSAGKILGKTVGFGPVTDLSLALALEEGEGPVESFLYGVGMDIKIPYFSYFQLNTYRRHAMGSDNISDGWQL
TPSFRMDFPVGNSNIVFDGYIDWVFATDEASYETNFHFNPQLKYDLGAVVLGDQQKNKLFVGIEYDYWKNKYGVDGMDQN
TYSVIAKYHF

Specific function: Unknown

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28141; Mature: 28141

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLLCLALLVSPTAMADNMVNWWDVSVTGLYGENYDLAPSDKQTAVTFETAGDWKYGD
CCCCEEEEEEECCCHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC
WFAFQDVTYFNGSNGGKDNSTYGEISTRFSAGKILGKTVGFGPVTDLSLALALEEGEGPV
EEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCHH
ESFLYGVGMDIKIPYFSYFQLNTYRRHAMGSDNISDGWQLTPSFRMDFPVGNSNIVFDGY
HHHHHHCCCEEECCEEEEEEEECHHHHCCCCCCCCCCEEECCCEEEECCCCCCCEEEEEE
IDWVFATDEASYETNFHFNPQLKYDLGAVVLGDQQKNKLFVGIEYDYWKNKYGVDGMDQN
EEEEEEECCCCCCCCEEECCEEEEECCEEEECCCCCCEEEEEEEEHHCCCCCCCCCCCCC
TYSVIAKYHF
CEEEEEEECC
>Mature Secondary Structure
MNKKLLCLALLVSPTAMADNMVNWWDVSVTGLYGENYDLAPSDKQTAVTFETAGDWKYGD
CCCCEEEEEEECCCHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCC
WFAFQDVTYFNGSNGGKDNSTYGEISTRFSAGKILGKTVGFGPVTDLSLALALEEGEGPV
EEEEEEEEEEECCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCHH
ESFLYGVGMDIKIPYFSYFQLNTYRRHAMGSDNISDGWQLTPSFRMDFPVGNSNIVFDGY
HHHHHHCCCEEECCEEEEEEEECHHHHCCCCCCCCCCEEECCCEEEECCCCCCCEEEEEE
IDWVFATDEASYETNFHFNPQLKYDLGAVVLGDQQKNKLFVGIEYDYWKNKYGVDGMDQN
EEEEEEECCCCCCCCEEECCEEEEECCEEEECCCCCCEEEEEEEEHHCCCCCCCCCCCCC
TYSVIAKYHF
CEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA