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The map label for this gene is ompA [H]

Identifier: 157960285

GI number: 157960285

Start: 565038

End: 566078

Strand: Reverse

Name: ompA [H]

Synonym: Spea_0456

Alternate gene names: 157960285

Gene position: 566078-565038 (Counterclockwise)

Preceding gene: 157960286

Following gene: 157960284

Centisome position: 10.94

GC content: 45.92

Gene sequence:

>1041_bases
ATGATGAACAAGACACTAATTGCACTCGCATTAATAGGTACTTGCGGTTACGCCAATGCAGCCGATGTTGATAACACTTG
GTACATAGGTGCAGGTGCAGGCCAAAGCAACTATGAGTCAGTTGACGCCGCTAGCCACCTAGGCGACGGCAGCGATTTAG
CTTGGAATGCCCTAGTAGGTTATCAACTAAACAAATATTTAGCCTTCGAAGCTGGCTGGCAAGATCTGGGTGCTACCGAT
GATACTCACATGTGGGGTGGTTTAGACGGTAGCCAGAAAATAGACGTTGACGGCTTTACTCTGGGTGTTGTGGGTACTTT
ACCGCTATCAGAAAAATGGTTCTTAACTGGTGAAGCTGGTGCTTATCAATATCACCTAGCACACCAGATGAGTGCCGATA
AGTATGTTAGCGCGATGGATACAGCCCCTTACTTTGGTGCAGGTGTGGGTTACAACATCACAGATTCTTTGGCGATTTCT
GCTAAGTACCGTCGTTTTGCCAAAATCGATGAAACAGCATGGAACACGGCAAACATGGACGCACAGACAGTGGGTCTACA
GCTGACTTATCGCTTCGGAGTGAAGGCTGCGACAACAACAGCAGTTGTACTACCTGCCGTGATTGAGAAGCAGACTAAAC
CTATGCCTCGTCCAGAGCCAAAGCCTGAGCCTAAGTATGAAATTCACACCGAAAAGAGCAGTGTAGCCGTACTATTTGGG
TTTGATTCTTCAGAGCTTAATAGCACAGCCAAGGCCAAGCTAGACCAAGTTATCAAGCTTTCAAAGAGTAAAGATCAAGA
TGTGATCTTACTTAACGGTCAATCAGATAACCAAGGTGATAGCCAATATAACCTTAAGCTATCTGAAAAACGTGTACAGC
ACGTAGAAGCCTACTTAGTTTCTCACGGTGTAGAAGTGAAGAAGATCGACACTCAAGCCGTTGGCGAGCAGGATGCTCAC
GCTAATTTACGTAAAGACCGCGCACTAGAGCGCCGTGTAATCGTAACCTTAACAAGCCAAGAAAAAGTACAAGCTTCTTA
A

Upstream 100 bases:

>100_bases
AATAATCATTATTGTATTTACTCTATCGCTCTAATTTAGCTAATCCCTCAAAATGCGCTCCATTGAAATGAGAGACTAAT
TAAAACTCAACGGAGATAAC

Downstream 100 bases:

>100_bases
TAGACAGCTAAAAATTGAGTATCGTCGATATGGACCCGACCTCGCTAGGATTGCGAAACGATACGCTAGGATCCCATAAG
TCTTACCGATTTAAGGGGGT

Product: OmpA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MMNKTLIALALIGTCGYANAADVDNTWYIGAGAGQSNYESVDAASHLGDGSDLAWNALVGYQLNKYLAFEAGWQDLGATD
DTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAGAYQYHLAHQMSADKYVSAMDTAPYFGAGVGYNITDSLAIS
AKYRRFAKIDETAWNTANMDAQTVGLQLTYRFGVKAATTTAVVLPAVIEKQTKPMPRPEPKPEPKYEIHTEKSSVAVLFG
FDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVEAYLVSHGVEVKKIDTQAVGEQDAH
ANLRKDRALERRVIVTLTSQEKVQAS

Sequences:

>Translated_346_residues
MMNKTLIALALIGTCGYANAADVDNTWYIGAGAGQSNYESVDAASHLGDGSDLAWNALVGYQLNKYLAFEAGWQDLGATD
DTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAGAYQYHLAHQMSADKYVSAMDTAPYFGAGVGYNITDSLAIS
AKYRRFAKIDETAWNTANMDAQTVGLQLTYRFGVKAATTTAVVLPAVIEKQTKPMPRPEPKPEPKYEIHTEKSSVAVLFG
FDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVEAYLVSHGVEVKKIDTQAVGEQDAH
ANLRKDRALERRVIVTLTSQEKVQAS
>Mature_346_residues
MMNKTLIALALIGTCGYANAADVDNTWYIGAGAGQSNYESVDAASHLGDGSDLAWNALVGYQLNKYLAFEAGWQDLGATD
DTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAGAYQYHLAHQMSADKYVSAMDTAPYFGAGVGYNITDSLAIS
AKYRRFAKIDETAWNTANMDAQTVGLQLTYRFGVKAATTTAVVLPAVIEKQTKPMPRPEPKPEPKYEIHTEKSSVAVLFG
FDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVEAYLVSHGVEVKKIDTQAVGEQDAH
ANLRKDRALERRVIVTLTSQEKVQAS

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=351, Percent_Identity=29.6296296296296, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 37665; Mature: 37665

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKTLIALALIGTCGYANAADVDNTWYIGAGAGQSNYESVDAASHLGDGSDLAWNALVG
CCCCCEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEHEEEC
YQLNKYLAFEAGWQDLGATDDTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAG
EECCEEEEEECCCHHCCCCCCCCEECCCCCCCEEECCCEEEEEEEECCCCCEEEEECCCC
AYQYHLAHQMSADKYVSAMDTAPYFGAGVGYNITDSLAISAKYRRFAKIDETAWNTANMD
CEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCC
AQTVGLQLTYRFGVKAATTTAVVLPAVIEKQTKPMPRPEPKPEPKYEIHTEKSSVAVLFG
CEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEE
FDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVEAYLV
CCHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH
SHGVEVKKIDTQAVGEQDAHANLRKDRALERRVIVTLTSQEKVQAS
HCCCEEEEECHHHCCCCCHHCHHHHHHHHCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MMNKTLIALALIGTCGYANAADVDNTWYIGAGAGQSNYESVDAASHLGDGSDLAWNALVG
CCCCCEEEEEEEHHCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEHEEEC
YQLNKYLAFEAGWQDLGATDDTHMWGGLDGSQKIDVDGFTLGVVGTLPLSEKWFLTGEAG
EECCEEEEEECCCHHCCCCCCCCEECCCCCCCEEECCCEEEEEEEECCCCCEEEEECCCC
AYQYHLAHQMSADKYVSAMDTAPYFGAGVGYNITDSLAISAKYRRFAKIDETAWNTANMD
CEEEEHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCCC
AQTVGLQLTYRFGVKAATTTAVVLPAVIEKQTKPMPRPEPKPEPKYEIHTEKSSVAVLFG
CEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEEE
FDSSELNSTAKAKLDQVIKLSKSKDQDVILLNGQSDNQGDSQYNLKLSEKRVQHVEAYLV
CCHHHHCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEHHHHHHHHHHHHH
SHGVEVKKIDTQAVGEQDAHANLRKDRALERRVIVTLTSQEKVQAS
HCCCEEEEECHHHCCCCCHHCHHHHHHHHCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6092858 [H]