| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960281
Identifier: 157960281
GI number: 157960281
Start: 561549
End: 561794
Strand: Reverse
Name: 157960281
Synonym: Spea_0452
Alternate gene names: NA
Gene position: 561794-561549 (Counterclockwise)
Preceding gene: 157960283
Following gene: 157960277
Centisome position: 10.86
GC content: 43.09
Gene sequence:
>246_bases ATGCTCATTGCATTAAAATCTAAAGAGAAGCGCAAGACCCCACTCAATCATGATGCTCACTGGGACGCAATGAGCGCCGA GCAAAAAATTGCCCTATATGATCTGCATAAATTTGGCTTTCGATTATTGTTCGTACGCCACCTGTCTAACGGCCCCCTAG CGTTTATTATGCAGAATAAAACACTTGCAGTGATCAGTAGAAACGGTGATGTCGACTATAAACCTGAAGTGAAGCTTAGA GCTTAG
Upstream 100 bases:
>100_bases GACTCAGTTAGCATTTTTTAATGAAAAACCAGTTATATTAGTGAGCTGTTGTATACTTAAACCTCACTGGCACAGACACG CTACCTATAGAGAGAAAAGC
Downstream 100 bases:
>100_bases AGTAAACGTTATTTAGGGTGGGTAAAACACATTAAAAAAGCGCACTTAGGTGCGCTTTATATTTTCAACCAGTCTTTTGC TAAAATTATTTATCTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MLIALKSKEKRKTPLNHDAHWDAMSAEQKIALYDLHKFGFRLLFVRHLSNGPLAFIMQNKTLAVISRNGDVDYKPEVKLR A
Sequences:
>Translated_81_residues MLIALKSKEKRKTPLNHDAHWDAMSAEQKIALYDLHKFGFRLLFVRHLSNGPLAFIMQNKTLAVISRNGDVDYKPEVKLR A >Mature_81_residues MLIALKSKEKRKTPLNHDAHWDAMSAEQKIALYDLHKFGFRLLFVRHLSNGPLAFIMQNKTLAVISRNGDVDYKPEVKLR A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9347; Mature: 9347
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIALKSKEKRKTPLNHDAHWDAMSAEQKIALYDLHKFGFRLLFVRHLSNGPLAFIMQNK CEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHEEEEEECCCCCEEEEECCC TLAVISRNGDVDYKPEVKLRA EEEEEECCCCCCCCCCEEEEC >Mature Secondary Structure MLIALKSKEKRKTPLNHDAHWDAMSAEQKIALYDLHKFGFRLLFVRHLSNGPLAFIMQNK CEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHEEEEEECCCCCEEEEECCC TLAVISRNGDVDYKPEVKLRA EEEEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA