Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is yuxK [H]

Identifier: 157960265

GI number: 157960265

Start: 542356

End: 542751

Strand: Direct

Name: yuxK [H]

Synonym: Spea_0436

Alternate gene names: 157960265

Gene position: 542356-542751 (Clockwise)

Preceding gene: 157960264

Following gene: 157960266

Centisome position: 10.48

GC content: 44.19

Gene sequence:

>396_bases
TTGGTTGTAAGCGTCATGCCTAGTGAAAAAGCCGTAGTGATATTCGATGGTGCTTGCAACCTGTGTGATGGCGCTGTGTG
TGTTATTACAAGGCATGATCCAAATAGCGTATTTGAGCTGGTAGCGTTGCAATCTATGCAAGGGCGAGCACTTCTGAGCC
AATTTAAATTAACGGATGTGGCAATGGACAGCGTGATCTTGATAAAGCAGGGGCAGTACTATCTGCGCAGTGACGCGATA
ATTGAAATTGCAAAATCACTGAGCGGCGCACCACGCCTAGTAAAGTACGTCGCTTTCTTTCCAAGGGTTTTGCGTAACGC
TACTTATAATTTTATTGCCAAACATCGTTATCGTCTATTTGGGCAAAAAGCGATTTGTCAGCTGCCTAAAAAGTAA

Upstream 100 bases:

>100_bases
CAATGAGTCGGCAAACTCAGCAGAACAAGTGATGGATATTGCCAGTTACTTGGTTGAGCTTGAAAGGCAAAATTTGTTAG
CCATGTAGACTCACATAACA

Downstream 100 bases:

>100_bases
TTGCCTCAAGCTATCTCATAAAAAGCTTTGCTTAAGCCTCTCCTCTTAATCGCTTCTACACGATTACACGTACTAGCCCA
GATTCTTACCCCGTCTCTTA

Product: putative thiol-disulfide oxidoreductase DCC

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MVVSVMPSEKAVVIFDGACNLCDGAVCVITRHDPNSVFELVALQSMQGRALLSQFKLTDVAMDSVILIKQGQYYLRSDAI
IEIAKSLSGAPRLVKYVAFFPRVLRNATYNFIAKHRYRLFGQKAICQLPKK

Sequences:

>Translated_131_residues
MVVSVMPSEKAVVIFDGACNLCDGAVCVITRHDPNSVFELVALQSMQGRALLSQFKLTDVAMDSVILIKQGQYYLRSDAI
IEIAKSLSGAPRLVKYVAFFPRVLRNATYNFIAKHRYRLFGQKAICQLPKK
>Mature_131_residues
MVVSVMPSEKAVVIFDGACNLCDGAVCVITRHDPNSVFELVALQSMQGRALLSQFKLTDVAMDSVILIKQGQYYLRSDAI
IEIAKSLSGAPRLVKYVAFFPRVLRNATYNFIAKHRYRLFGQKAICQLPKK

Specific function: Unknown

COG id: COG3011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007263 [H]

Pfam domain/function: PF04134 DUF393 [H]

EC number: NA

Molecular weight: Translated: 14627; Mature: 14627

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVSVMPSEKAVVIFDGACNLCDGAVCVITRHDPNSVFELVALQSMQGRALLSQFKLTDV
CEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AMDSVILIKQGQYYLRSDAIIEIAKSLSGAPRLVKYVAFFPRVLRNATYNFIAKHRYRLF
HHCEEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GQKAICQLPKK
CCHHHHCCCCC
>Mature Secondary Structure
MVVSVMPSEKAVVIFDGACNLCDGAVCVITRHDPNSVFELVALQSMQGRALLSQFKLTDV
CEEEECCCCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
AMDSVILIKQGQYYLRSDAIIEIAKSLSGAPRLVKYVAFFPRVLRNATYNFIAKHRYRLF
HHCEEEEEECCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
GQKAICQLPKK
CCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961491; 9274030; 9384377 [H]