Click here to switch to the map view.

The map label for this gene is yacF [C]

Identifier: 157960238

GI number: 157960238

Start: 501639

End: 502373

Strand: Reverse

Name: yacF [C]

Synonym: Spea_0409

Alternate gene names: 157960238

Gene position: 502373-501639 (Counterclockwise)

Preceding gene: 157960239

Following gene: 157960237

Centisome position: 9.71

GC content: 43.13

Gene sequence:

>735_bases
ATGACTGAATTGATCTATGAACAGCCTTTGAACGAAAAAACTCGTAGCTACCTGCGCCTAGAATATTTAGCGCAGCAGCT
GCAGGCCAACCTAGATCAAGATCACCAACATCGCTGTTTTTACCCCTTATTCTCTTTATGCGAGCTAACCGAACGCTGCG
ATTACCGTGGTGAAATCCTCAAAGACTTAGATAGACAACTGTTTGCCTTATCGAAATGGCAATCACTACCTTCTATTAAT
GATGAGCAAGTTGAACGATATATATCAAAGTTAAGTACTTGCAGAGAGATATTACAAGCCTCCCAACGACCAGGCCATGA
ACTACAAAAAGATCGCTTCTTGTCTGCACTTCGGCAAAGATTCAATATGCCAGGCGCAAGTTGTAACTTTGACTTACCGC
AACTACATTACTGGCTAGCAAAACCTTGGGAAGACCGTCAATGTGAATATCAAGATTGGGTAAGCCACTTTGCAAGTATA
CTTTCACCTGTAATTTTGCTACTGGACTTAACAAGGCAGACAACTGAGTACCAATTGCAGCAGGCTTGTGGTGGCTTTTA
CCAAGGCTGTAGTAAGCAGCCTTTATCTCTAATACGGGTCAAGCTCGCCGCAGAGCAAGGTTGTTACCCAACCATTAGTG
GCAATAGGAACCGCTACGCTATTCACTTTGTAAAGTTTGACCAACAAAAACACTCAGATCAAACTATCGAATTCGAGTTG
GCAACCTGCGCCTAA

Upstream 100 bases:

>100_bases
ATGTCATAGACAATCAAGGAGAGATATCGGCGTTAAAGTGCAAGGTACTCGCACTACATAACTTTTATTTAAAATTAGCC
AGTAATTCTTGAATAACGCC

Downstream 100 bases:

>100_bases
CACTTTAAAATCTACTAATACACTATCAAGCGTCAGCCTCTTAACTGACAAGGTTCTCTATGTCTTTAACCGTAAAATGC
CCAACCTGCCAAACACCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTELIYEQPLNEKTRSYLRLEYLAQQLQANLDQDHQHRCFYPLFSLCELTERCDYRGEILKDLDRQLFALSKWQSLPSIN
DEQVERYISKLSTCREILQASQRPGHELQKDRFLSALRQRFNMPGASCNFDLPQLHYWLAKPWEDRQCEYQDWVSHFASI
LSPVILLLDLTRQTTEYQLQQACGGFYQGCSKQPLSLIRVKLAAEQGCYPTISGNRNRYAIHFVKFDQQKHSDQTIEFEL
ATCA

Sequences:

>Translated_244_residues
MTELIYEQPLNEKTRSYLRLEYLAQQLQANLDQDHQHRCFYPLFSLCELTERCDYRGEILKDLDRQLFALSKWQSLPSIN
DEQVERYISKLSTCREILQASQRPGHELQKDRFLSALRQRFNMPGASCNFDLPQLHYWLAKPWEDRQCEYQDWVSHFASI
LSPVILLLDLTRQTTEYQLQQACGGFYQGCSKQPLSLIRVKLAAEQGCYPTISGNRNRYAIHFVKFDQQKHSDQTIEFEL
ATCA
>Mature_243_residues
TELIYEQPLNEKTRSYLRLEYLAQQLQANLDQDHQHRCFYPLFSLCELTERCDYRGEILKDLDRQLFALSKWQSLPSIND
EQVERYISKLSTCREILQASQRPGHELQKDRFLSALRQRFNMPGASCNFDLPQLHYWLAKPWEDRQCEYQDWVSHFASIL
SPVILLLDLTRQTTEYQLQQACGGFYQGCSKQPLSLIRVKLAAEQGCYPTISGNRNRYAIHFVKFDQQKHSDQTIEFELA
TCA

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=246, Percent_Identity=35.3658536585366, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28741; Mature: 28610

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELIYEQPLNEKTRSYLRLEYLAQQLQANLDQDHQHRCFYPLFSLCELTERCDYRGEIL
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
KDLDRQLFALSKWQSLPSINDEQVERYISKLSTCREILQASQRPGHELQKDRFLSALRQR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FNMPGASCNFDLPQLHYWLAKPWEDRQCEYQDWVSHFASILSPVILLLDLTRQTTEYQLQ
HCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QACGGFYQGCSKQPLSLIRVKLAAEQGCYPTISGNRNRYAIHFVKFDQQKHSDQTIEFEL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEE
ATCA
ECCC
>Mature Secondary Structure 
TELIYEQPLNEKTRSYLRLEYLAQQLQANLDQDHQHRCFYPLFSLCELTERCDYRGEIL
CCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
KDLDRQLFALSKWQSLPSINDEQVERYISKLSTCREILQASQRPGHELQKDRFLSALRQR
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
FNMPGASCNFDLPQLHYWLAKPWEDRQCEYQDWVSHFASILSPVILLLDLTRQTTEYQLQ
HCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QACGGFYQGCSKQPLSLIRVKLAAEQGCYPTISGNRNRYAIHFVKFDQQKHSDQTIEFEL
HHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEE
ATCA
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]