Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960234

Identifier: 157960234

GI number: 157960234

Start: 492003

End: 492536

Strand: Reverse

Name: 157960234

Synonym: Spea_0405

Alternate gene names: NA

Gene position: 492536-492003 (Counterclockwise)

Preceding gene: 157960235

Following gene: 157960227

Centisome position: 9.52

GC content: 39.14

Gene sequence:

>534_bases
ATGCACAACAACGTTAAAGCATTACTCGCAACCACATTGTTATTTTTCAGTAGTCAAAGTATGGCGAGTAGCGGCTGCGC
ATTTGAAGATAAACAAGATGGCTTTCTAGCAACTTGCTCTGAGGAGAAACAAGAAGTGATTTTAACTGGTGCAGTAACAC
ATCAAGAGCTTAATGAATTTGACTGGTTTACCGATGAGTATACAAATTATAGCGCTGATGCGTCTGTGATTAGCCAGCTT
CAAAAAATAGATACGCCGACAGAGGTCATAGTCATCATAGGTACATGGTGCTCAGACTGTCACCGCGAAACCCCAAGGTT
CATTCGTATTATCGAAGAAATTAATAATCCAAACATTAAAGTGACTTATATAGGCGTTGATAGAGAAAAACAAGATCCAC
AAGGTTTAGCCGCTAATTACGAGTTCAGTCGTATCCCAACCTTTATTGTTGAGCAAGATGGTAAAGAGATAGGACGTATT
GTTGAAAAACCCGAAGTGTCTTTAGAAGCTGATTTACTAGGCATTTTAAAGTAG

Upstream 100 bases:

>100_bases
AGAGTGATCCCTATAACAATGCGGCGATTGTTAGCTTCAACCATTTGTTAGGACGTGTTTGAATAAACTAAAACCTATTC
TTCTTGGCTGAGGTATTATC

Downstream 100 bases:

>100_bases
TCAGCTGTCATATAAAAAGAAAAGGCACTCATTGAGTGCCTTTTTTCGTAGGTCAACTAAAACTTATCAATCATAGCTTA
GAAACTTTGAGAGAATGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Thioredoxin-Like Protein

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MHNNVKALLATTLLFFSSQSMASSGCAFEDKQDGFLATCSEEKQEVILTGAVTHQELNEFDWFTDEYTNYSADASVISQL
QKIDTPTEVIVIIGTWCSDCHRETPRFIRIIEEINNPNIKVTYIGVDREKQDPQGLAANYEFSRIPTFIVEQDGKEIGRI
VEKPEVSLEADLLGILK

Sequences:

>Translated_177_residues
MHNNVKALLATTLLFFSSQSMASSGCAFEDKQDGFLATCSEEKQEVILTGAVTHQELNEFDWFTDEYTNYSADASVISQL
QKIDTPTEVIVIIGTWCSDCHRETPRFIRIIEEINNPNIKVTYIGVDREKQDPQGLAANYEFSRIPTFIVEQDGKEIGRI
VEKPEVSLEADLLGILK
>Mature_177_residues
MHNNVKALLATTLLFFSSQSMASSGCAFEDKQDGFLATCSEEKQEVILTGAVTHQELNEFDWFTDEYTNYSADASVISQL
QKIDTPTEVIVIIGTWCSDCHRETPRFIRIIEEINNPNIKVTYIGVDREKQDPQGLAANYEFSRIPTFIVEQDGKEIGRI
VEKPEVSLEADLLGILK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19924; Mature: 19924

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNNVKALLATTLLFFSSQSMASSGCAFEDKQDGFLATCSEEKQEVILTGAVTHQELNEF
CCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHC
DWFTDEYTNYSADASVISQLQKIDTPTEVIVIIGTWCSDCHRETPRFIRIIEEINNPNIK
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCHHHHHHHHHHCCCCEE
VTYIGVDREKQDPQGLAANYEFSRIPTFIVEQDGKEIGRIVEKPEVSLEADLLGILK
EEEEECCCCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MHNNVKALLATTLLFFSSQSMASSGCAFEDKQDGFLATCSEEKQEVILTGAVTHQELNEF
CCCCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEECCCCCCEEEEEECHHHHHHHHC
DWFTDEYTNYSADASVISQLQKIDTPTEVIVIIGTWCSDCHRETPRFIRIIEEINNPNIK
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCHHHHHHHHHHCCCCEE
VTYIGVDREKQDPQGLAANYEFSRIPTFIVEQDGKEIGRIVEKPEVSLEADLLGILK
EEEEECCCCCCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA