| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is ilvK [H]
Identifier: 157960156
GI number: 157960156
Start: 366353
End: 367444
Strand: Direct
Name: ilvK [H]
Synonym: Spea_0327
Alternate gene names: 157960156
Gene position: 366353-367444 (Clockwise)
Preceding gene: 157960155
Following gene: 157960162
Centisome position: 7.08
GC content: 48.44
Gene sequence:
>1092_bases ATGCAAATAACTTATAATTTAAAACCTGCGTTAGAGCGCCGTACCGAGCAATTTAAGCCGACAACTAATGTAGGCTTCGG TAACCTCAGAACTGACCACATGTTTTTAATGGATTATCGCGACGGCGAGTGGTGTGATCCAAGAGTCGTTCCCTATGGCC CATTTCAAGTCGCACCGGGTGCCATCGCTCTACATTATGGTCAGTCTGTATTTGAGGGCGCAAAAGCCTTTCAACATGAC GACGGTGAGATCTACACCTTCCGTATCGATAAAAATGCCGAGCGCTTAAATCGCTCTGCTGACATTTTGTGTATTCCAGC GCTGCCTGAGCAGATGCAGGTTGATGCCATCAATGCCTTGATTGATGTCGATCGTCTATGGTTTCCGATGCAGGAAGGGG CTTGCCTGTATATTCGTCCGTTTATCTTTGCCACAGAAGATCGTCTATCGGTTAGTCCGAGCGAGCAATACACTTTCTGC GTAATATTAAGCCCAAGCGGGCCTTATTACAGCGATGGCTTCGATAAGGCGATCCGTTTATTGATCAGTGAGCGTTTCCA CCGTGCAGTTTCGGGTGGTACTGGCGCATCGAAGGCTGCGGGTAACTACGCGGCATCACTAAAAGCGGGTAAGGCGGCTG CTGAATATGGCGCCGCGCAGGTACTTTACCTAGATGCTAACAATAAGCAGATTGAAGAAGTGGGCGCGATGAACCATTTT CACGTGCTTAAAGATGGCACCATTATTATCCCTAAGTTCACCGACACCATCTTAAAGTCGATTACCTCACAGTCTATTCT CGATTTGGGTGAGTTACTGGGCTGCGAAGTACGCCAAGAGACAGTGATGCTGGAGCAGTTTATTAGCGACATAGAGTCGG GTGAGATTATCGAGGCGGGCGGTTTTGGTACTGCGGCCGTGGTATCGCCAGTGGGTTCTTATATCTTTGAAGATAACCGC ATCGTAACCGTTGGAAACGGTGAAGTGGGTGAGCACACTAAGCGAATTTACAAGGTATTGACCGATATTCAGAAGGGGCT TATTCAAGGTCCTGCAGGCTGGGTACAGTACGTTAAGCGTGTGCAAGCTTAG
Upstream 100 bases:
>100_bases CCGTTCTTGGTTATTGAAGAACTTGAAGCTAGCCCCCGTTTTGCTTGACTTTTTTATGACCACTGATAGGCTGCTCAGTC AGTAATCAAGGTGGTATACA
Downstream 100 bases:
>100_bases CCTTCACTTAGCTGACCAAACCCTGCAGAAGGCTCCTTATGGGGCCTTTTTTATGGGGGGCTCTTTTTAAGCGCCACTCT TTTACAGTGCAGCTCTTTTA
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT 2; Vegetative protein 85; VEG85 [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MQITYNLKPALERRTEQFKPTTNVGFGNLRTDHMFLMDYRDGEWCDPRVVPYGPFQVAPGAIALHYGQSVFEGAKAFQHD DGEIYTFRIDKNAERLNRSADILCIPALPEQMQVDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSEQYTFC VILSPSGPYYSDGFDKAIRLLISERFHRAVSGGTGASKAAGNYAASLKAGKAAAEYGAAQVLYLDANNKQIEEVGAMNHF HVLKDGTIIIPKFTDTILKSITSQSILDLGELLGCEVRQETVMLEQFISDIESGEIIEAGGFGTAAVVSPVGSYIFEDNR IVTVGNGEVGEHTKRIYKVLTDIQKGLIQGPAGWVQYVKRVQA
Sequences:
>Translated_363_residues MQITYNLKPALERRTEQFKPTTNVGFGNLRTDHMFLMDYRDGEWCDPRVVPYGPFQVAPGAIALHYGQSVFEGAKAFQHD DGEIYTFRIDKNAERLNRSADILCIPALPEQMQVDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSEQYTFC VILSPSGPYYSDGFDKAIRLLISERFHRAVSGGTGASKAAGNYAASLKAGKAAAEYGAAQVLYLDANNKQIEEVGAMNHF HVLKDGTIIIPKFTDTILKSITSQSILDLGELLGCEVRQETVMLEQFISDIESGEIIEAGGFGTAAVVSPVGSYIFEDNR IVTVGNGEVGEHTKRIYKVLTDIQKGLIQGPAGWVQYVKRVQA >Mature_363_residues MQITYNLKPALERRTEQFKPTTNVGFGNLRTDHMFLMDYRDGEWCDPRVVPYGPFQVAPGAIALHYGQSVFEGAKAFQHD DGEIYTFRIDKNAERLNRSADILCIPALPEQMQVDAINALIDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSEQYTFC VILSPSGPYYSDGFDKAIRLLISERFHRAVSGGTGASKAAGNYAASLKAGKAAAEYGAAQVLYLDANNKQIEEVGAMNHF HVLKDGTIIIPKFTDTILKSITSQSILDLGELLGCEVRQETVMLEQFISDIESGEIIEAGGFGTAAVVSPVGSYIFEDNR IVTVGNGEVGEHTKRIYKVLTDIQKGLIQGPAGWVQYVKRVQA
Specific function: Transaminates branched-chain amino acids and ketoglutarate [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=335, Percent_Identity=34.6268656716418, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI296010904, Length=332, Percent_Identity=35.5421686746988, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI296010906, Length=332, Percent_Identity=35.5421686746988, Blast_Score=188, Evalue=5e-48, Organism=Homo sapiens, GI38176287, Length=332, Percent_Identity=35.5421686746988, Blast_Score=188, Evalue=6e-48, Organism=Homo sapiens, GI258614015, Length=286, Percent_Identity=34.965034965035, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI296010902, Length=332, Percent_Identity=31.6265060240964, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI296010900, Length=332, Percent_Identity=31.6265060240964, Blast_Score=149, Evalue=4e-36, Organism=Escherichia coli, GI48994963, Length=321, Percent_Identity=31.1526479750779, Blast_Score=119, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17568601, Length=359, Percent_Identity=33.7047353760446, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17565728, Length=341, Percent_Identity=33.4310850439883, Blast_Score=169, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6322002, Length=361, Percent_Identity=32.9639889196676, Blast_Score=185, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6322608, Length=340, Percent_Identity=34.1176470588235, Blast_Score=182, Evalue=1e-46, Organism=Drosophila melanogaster, GI24641779, Length=349, Percent_Identity=34.6704871060172, Blast_Score=184, Evalue=1e-46,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 40136; Mature: 40136
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQITYNLKPALERRTEQFKPTTNVGFGNLRTDHMFLMDYRDGEWCDPRVVPYGPFQVAPG CEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCC AIALHYGQSVFEGAKAFQHDDGEIYTFRIDKNAERLNRSADILCIPALPEQMQVDAINAL EEEEECCHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCEEEECCCCCHHHHHHHHHH IDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSEQYTFCVILSPSGPYYSDGFDKAIRL HHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LISERFHRAVSGGTGASKAAGNYAASLKAGKAAAEYGAAQVLYLDANNKQIEEVGAMNHF HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEEEEECCCCHHHHHCCCCCE HVLKDGTIIIPKFTDTILKSITSQSILDLGELLGCEVRQETVMLEQFISDIESGEIIEAG EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC GFGTAAVVSPVGSYIFEDNRIVTVGNGEVGEHTKRIYKVLTDIQKGLIQGPAGWVQYVKR CCCHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VQA HCC >Mature Secondary Structure MQITYNLKPALERRTEQFKPTTNVGFGNLRTDHMFLMDYRDGEWCDPRVVPYGPFQVAPG CEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCC AIALHYGQSVFEGAKAFQHDDGEIYTFRIDKNAERLNRSADILCIPALPEQMQVDAINAL EEEEECCHHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCCCEEEECCCCCHHHHHHHHHH IDVDRLWFPMQEGACLYIRPFIFATEDRLSVSPSEQYTFCVILSPSGPYYSDGFDKAIRL HHHHHHCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHH LISERFHRAVSGGTGASKAAGNYAASLKAGKAAAEYGAAQVLYLDANNKQIEEVGAMNHF HHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHCCCEEEEEEECCCCHHHHHCCCCCE HVLKDGTIIIPKFTDTILKSITSQSILDLGELLGCEVRQETVMLEQFISDIESGEIIEAG EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEC GFGTAAVVSPVGSYIFEDNRIVTVGNGEVGEHTKRIYKVLTDIQKGLIQGPAGWVQYVKR CCCHHHHHHHHHHHEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VQA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 7934828; 9298659 [H]