| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960157
Identifier: 157960157
GI number: 157960157
Start: 367542
End: 367940
Strand: Reverse
Name: 157960157
Synonym: Spea_0328
Alternate gene names: NA
Gene position: 367940-367542 (Counterclockwise)
Preceding gene: 157960158
Following gene: 157960154
Centisome position: 7.11
GC content: 46.12
Gene sequence:
>399_bases TTGTATCACAACTTTAAGCGAGCTCGTGTCTTATTCATCGCCCTGTTTTTGCTTAATGGCGTGGGCTGTGCAAATCAACC CCCTTCCCACGCAACGCAATCCCCGTTAAAACTCAACGGTAGCGAGATGGCTTACTTCTGGGTGACAAAAGACACCCTTA TCAGCTGGCAACAAATATTCCCCCAATCAGCAGCTAGCCCACAAAAGAAAACCAACTATGCGGTTTCTTTTATCATTGAC GCTTCAGGGGCTATGCAACAGGTCAGTATGATTAGCACGGTCGATGGAACTAAGATCCCCGCAGAGAAGCTAACAGGTGT AAGCGATTATCAATTTTACCCCACAGCGAAAAACTTTAGCCGCCAAGCAGTGATGGTTAACACCTTTGTTGCACTTTAA
Upstream 100 bases:
>100_bases CTGCACATACTTAGAGCATGTCAACCAATTGACTAGACGTAGGCCGTGATAACAGATAACTTGCCTTTACACTTCACCAA ACCGTAACAAAGGTGTTATT
Downstream 100 bases:
>100_bases AAGAGCTGCACTGTAAAAGAGTGGCGCTTAAAAAGAGCCCCCCATAAAAAAGGCCCCATAAGGAGCCTTCTGCAGGGTTT GGTCAGCTAAGTGAAGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MYHNFKRARVLFIALFLLNGVGCANQPPSHATQSPLKLNGSEMAYFWVTKDTLISWQQIFPQSAASPQKKTNYAVSFIID ASGAMQQVSMISTVDGTKIPAEKLTGVSDYQFYPTAKNFSRQAVMVNTFVAL
Sequences:
>Translated_132_residues MYHNFKRARVLFIALFLLNGVGCANQPPSHATQSPLKLNGSEMAYFWVTKDTLISWQQIFPQSAASPQKKTNYAVSFIID ASGAMQQVSMISTVDGTKIPAEKLTGVSDYQFYPTAKNFSRQAVMVNTFVAL >Mature_132_residues MYHNFKRARVLFIALFLLNGVGCANQPPSHATQSPLKLNGSEMAYFWVTKDTLISWQQIFPQSAASPQKKTNYAVSFIID ASGAMQQVSMISTVDGTKIPAEKLTGVSDYQFYPTAKNFSRQAVMVNTFVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14631; Mature: 14631
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYHNFKRARVLFIALFLLNGVGCANQPPSHATQSPLKLNGSEMAYFWVTKDTLISWQQIF CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECHHHHHHHHHC PQSAASPQKKTNYAVSFIIDASGAMQQVSMISTVDGTKIPAEKLTGVSDYQFYPTAKNFS CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCEEECCCCCCC RQAVMVNTFVAL CCEEEEEEEECC >Mature Secondary Structure MYHNFKRARVLFIALFLLNGVGCANQPPSHATQSPLKLNGSEMAYFWVTKDTLISWQQIF CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEEEEEECHHHHHHHHHC PQSAASPQKKTNYAVSFIIDASGAMQQVSMISTVDGTKIPAEKLTGVSDYQFYPTAKNFS CCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCEEECCCCCCC RQAVMVNTFVAL CCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA