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The map label for this gene is ccmE [H]

Identifier: 157960040

GI number: 157960040

Start: 225056

End: 225544

Strand: Reverse

Name: ccmE [H]

Synonym: Spea_0211

Alternate gene names: 157960040

Gene position: 225544-225056 (Counterclockwise)

Preceding gene: 157960041

Following gene: 157959999

Centisome position: 4.36

GC content: 45.6

Gene sequence:

>489_bases
GTGAATCCTAGACGTAAAAAACGCCTTACCCTTGCTGTAGCCTTAATTGGTGGTGTTGCAGCGATCGCTTCTTTGCTTTT
ATACGCTTTGAACTCAAATCTAAACCTATTCTTTACTCCAACAGAGATTGTACAGGGTAAGAAAGATACCGGCGTTATGC
CAGAGATTGGCCAGCGCATCCGTGTTGGCGGCATGGTGACCGTAGGTTCAATGGTACGCGATCCTAACAGCTTGCATGTT
GAGTTTGCGATCCATGATGCTGCTGGCGGCGAAATCATCGTAACTTATGATGATCTACTACCGGATCTTTTCCGTGAAGG
ACAAGGTATTGTTGCACAGGGTGTCTTGTCTGCTCCTGGAGTTTTAGAAGCGACAGAAGTTCTTGCGAAGCATGATGAAA
ACTACATGCCACCAGAAGTTGCCGAAGCTATGGGCCAAACTCACGAGAAATTGGATTATAACCAAGAACAAAAATCTGGC
GGTTACTAA

Upstream 100 bases:

>100_bases
TAGTTGTCCTTAGTGTTAGACAGAAACGCAAGGTGTTAGTAGAAATCGCGAAGAAGATCCAGCGCGAAGAACGCCTAAAA
GAAACTCGGAGTACAAAATA

Downstream 100 bases:

>100_bases
ACCAGATTTGCTCTCATCTAAAAAGCCTTCTTAACGGAGGCTTTTTTTATGCCCATCATTTGTTAATCTATACCGCACAC
AAGCCGCCATCTACGCTTAA

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: Cytochrome c maturation protein E; Heme chaperone CcmE [H]

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFFTPTEIVQGKKDTGVMPEIGQRIRVGGMVTVGSMVRDPNSLHV
EFAIHDAAGGEIIVTYDDLLPDLFREGQGIVAQGVLSAPGVLEATEVLAKHDENYMPPEVAEAMGQTHEKLDYNQEQKSG
GY

Sequences:

>Translated_162_residues
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFFTPTEIVQGKKDTGVMPEIGQRIRVGGMVTVGSMVRDPNSLHV
EFAIHDAAGGEIIVTYDDLLPDLFREGQGIVAQGVLSAPGVLEATEVLAKHDENYMPPEVAEAMGQTHEKLDYNQEQKSG
GY
>Mature_162_residues
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFFTPTEIVQGKKDTGVMPEIGQRIRVGGMVTVGSMVRDPNSLHV
EFAIHDAAGGEIIVTYDDLLPDLFREGQGIVAQGVLSAPGVLEATEVLAKHDENYMPPEVAEAMGQTHEKLDYNQEQKSG
GY

Specific function: Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH [H]

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmE/CycJ family [H]

Homologues:

Organism=Escherichia coli, GI1788525, Length=150, Percent_Identity=58, Blast_Score=176, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004329
- InterPro:   IPR012340 [H]

Pfam domain/function: PF03100 CcmE [H]

EC number: NA

Molecular weight: Translated: 17488; Mature: 17488

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFFTPTEIVQGKKDTGVMPEIGQRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCCHHHHHHE
RVGGMVTVGSMVRDPNSLHVEFAIHDAAGGEIIVTYDDLLPDLFREGQGIVAQGVLSAPG
ECCCEEEEHHHHCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEHHCCCCCC
VLEATEVLAKHDENYMPPEVAEAMGQTHEKLDYNQEQKSGGY
HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNPRRKKRLTLAVALIGGVAAIASLLLYALNSNLNLFFTPTEIVQGKKDTGVMPEIGQRI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCCCCCCHHHHHHE
RVGGMVTVGSMVRDPNSLHVEFAIHDAAGGEIIVTYDDLLPDLFREGQGIVAQGVLSAPG
ECCCEEEEHHHHCCCCCEEEEEEEEECCCCEEEEEHHHHHHHHHHCCCCEEEHHCCCCCC
VLEATEVLAKHDENYMPPEVAEAMGQTHEKLDYNQEQKSGGY
HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA