| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is exeN [H]
Identifier: 157959984
GI number: 157959984
Start: 169593
End: 170351
Strand: Direct
Name: exeN [H]
Synonym: Spea_0154
Alternate gene names: 157959984
Gene position: 169593-170351 (Clockwise)
Preceding gene: 157959983
Following gene: 157959986
Centisome position: 3.28
GC content: 44.01
Gene sequence:
>759_bases GTGAAATTAGCAAAGATGATTGCGTTAGGCTTTTTAGTCTACTTGGTATTTTTAGTGGTGCAGTTTCCGGCCAATTTCGC AGTTAAGCTGGCGCCTTTACCAAACAATGTCGCCATTAGTGGTGTGTCAGGCACGATTTGGGCGGGTAAGATCGATATGC TCAGCGTGCAAAAGCGCCAAGTGGAAATGATAACTTGGGATTTGAATGTCTGGTCTTTATTGACTGGCACAGTTAAGGCC GATGTGGTGATCGGTAATCGGGCTAGTGCGGTAAACGGTAAAGGAACTGTCGCTTATTCGTTTAGTGGATTAGACGTTTC AGGCTTAAGGTTTGAAGCGCCGAGCAGCTTCTTATTAGGGCGCACTAACTTACCCTTTAGAACCAAAGTTAATGGTGACT TAAGCGTGTTGGTAGATAACTTTGAGCAGGGCATGCCTTGGTGTGAACAGTTATCTGGTAAGTTATTTTTGAATCAAGTG AATGTTACTAACCAGTTTGGTAAGTACCCACTTGGCGATATTGCGCTTGGACTCGCCTGTCTTGATGGCAAAGTTGAATT GACCACAGACGAAAAGCTTAATGGACTTGGCCTCGATGGCAATATCGTATTAGCCGATAACAAGATGATACAGGTGAACG CCAAGATCCGTGAAGTGAACACTCAGCCAGATGACTTGAAGAAGGCGTTATCATTCTTAGGTAAGAAAGATAGCCAAGGT TATTACCCGATAACCTATCAAGGACGTTTACCTATCTAG
Upstream 100 bases:
>100_bases GAACAAGGGCTTGTCATTAGAAAGCTTAGACTTAGCAGAGTCTGATACTCCAGGCTATGTTAATGTTCGTCGTATTCAGC TGTCCAAGTAAGGTGTTGTA
Downstream 100 bases:
>100_bases TAAGCTCAGTTTGGATACTTTAAAGGCGCCTAAACAGCGCCTTTTTTGTTTTTGATTTTTTATATTTGGTTCTTTTACAG CTGTGAATTGCTACGGTTGC
Product: type II secretion system protein N
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKLAKMIALGFLVYLVFLVVQFPANFAVKLAPLPNNVAISGVSGTIWAGKIDMLSVQKRQVEMITWDLNVWSLLTGTVKA DVVIGNRASAVNGKGTVAYSFSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGMPWCEQLSGKLFLNQV NVTNQFGKYPLGDIALGLACLDGKVELTTDEKLNGLGLDGNIVLADNKMIQVNAKIREVNTQPDDLKKALSFLGKKDSQG YYPITYQGRLPI
Sequences:
>Translated_252_residues MKLAKMIALGFLVYLVFLVVQFPANFAVKLAPLPNNVAISGVSGTIWAGKIDMLSVQKRQVEMITWDLNVWSLLTGTVKA DVVIGNRASAVNGKGTVAYSFSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGMPWCEQLSGKLFLNQV NVTNQFGKYPLGDIALGLACLDGKVELTTDEKLNGLGLDGNIVLADNKMIQVNAKIREVNTQPDDLKKALSFLGKKDSQG YYPITYQGRLPI >Mature_252_residues MKLAKMIALGFLVYLVFLVVQFPANFAVKLAPLPNNVAISGVSGTIWAGKIDMLSVQKRQVEMITWDLNVWSLLTGTVKA DVVIGNRASAVNGKGTVAYSFSGLDVSGLRFEAPSSFLLGRTNLPFRTKVNGDLSVLVDNFEQGMPWCEQLSGKLFLNQV NVTNQFGKYPLGDIALGLACLDGKVELTTDEKLNGLGLDGNIVLADNKMIQVNAKIREVNTQPDDLKKALSFLGKKDSQG YYPITYQGRLPI
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP N family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022792 - InterPro: IPR000645 [H]
Pfam domain/function: PF01203 GSPII_N [H]
EC number: NA
Molecular weight: Translated: 27431; Mature: 27431
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAKMIALGFLVYLVFLVVQFPANFAVKLAPLPNNVAISGVSGTIWAGKIDMLSVQKRQ CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEECCEEEEECCCCE VEMITWDLNVWSLLTGTVKADVVIGNRASAVNGKGTVAYSFSGLDVSGLRFEAPSSFLLG EEEEEEECCHHHHEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEE RTNLPFRTKVNGDLSVLVDNFEQGMPWCEQLSGKLFLNQVNVTNQFGKYPLGDIALGLAC CCCCCEEEECCCCEEEEEECHHCCCCHHHHCCCEEEEEEECCCHHCCCCCCHHHHEEEEE LDGKVELTTDEKLNGLGLDGNIVLADNKMIQVNAKIREVNTQPDDLKKALSFLGKKDSQG ECCEEEEECCCCCCCCCCCCCEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC YYPITYQGRLPI EEEEEECCCCCC >Mature Secondary Structure MKLAKMIALGFLVYLVFLVVQFPANFAVKLAPLPNNVAISGVSGTIWAGKIDMLSVQKRQ CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCEEEECCEEEEECCCCE VEMITWDLNVWSLLTGTVKADVVIGNRASAVNGKGTVAYSFSGLDVSGLRFEAPSSFLLG EEEEEEECCHHHHEECCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEECCCCEEEE RTNLPFRTKVNGDLSVLVDNFEQGMPWCEQLSGKLFLNQVNVTNQFGKYPLGDIALGLAC CCCCCEEEECCCCEEEEEECHHCCCCHHHHCCCEEEEEEECCCHHCCCCCCHHHHEEEEE LDGKVELTTDEKLNGLGLDGNIVLADNKMIQVNAKIREVNTQPDDLKKALSFLGKKDSQG ECCEEEEECCCCCCCCCCCCCEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCC YYPITYQGRLPI EEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]