| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157959909
Identifier: 157959909
GI number: 157959909
Start: 88938
End: 89351
Strand: Reverse
Name: 157959909
Synonym: Spea_0079
Alternate gene names: NA
Gene position: 89351-88938 (Counterclockwise)
Preceding gene: 157959910
Following gene: 157959905
Centisome position: 1.73
GC content: 46.14
Gene sequence:
>414_bases ATGAAACAGCTACTAAAACTATGCCAGCAAGAGGAAAAGAAACTCGGACAGCTAGGGCTACAGCGAAATAACGCCCAGAC TCGTATCAATGACATTGAGCAGCAAAAGCAGCTCCTAAGCCAAATGGTCAGCGATTACACTCAGTTTAGTGTGAAGGGCG GAACGGCTATGATGCTGCAAAATAGCGCTCAAATGATCCAAGTCATCGAGCCAATGCAGAAACAATTGCTGCGTAAGCAA CTACTTTTACAGCAGGAGCATCAAAGAATGGATAACCTTTGGCGCCGTCAATTAGGCCGCCAGCAAGGAATACACTGGCT TTATCAAGAGCGGAAGCAACAACTTCAATACCAGCAAGATCGCCAAGAACAGAAGCAATTAGATGATCTAGCGGGACGTT ACGCTACCACTTAG
Upstream 100 bases:
>100_bases GTCAAAGTACCAACTCACAAGCCGATCATGCCCATAGCATCACGGCCTTAGCGCAATTAGTCAGCAACATGGGATATTCA TTGTAGAGTAGAGAAGCATA
Downstream 100 bases:
>100_bases GCGACAAACGTCCTTTTAGCGCAGATCACCATAATCAATTGCCAGCTCATTGCTCGGGTTCAGGAGTTGGTTAATCACCT CCTGCTGCGCGACCAATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MKQLLKLCQQEEKKLGQLGLQRNNAQTRINDIEQQKQLLSQMVSDYTQFSVKGGTAMMLQNSAQMIQVIEPMQKQLLRKQ LLLQQEHQRMDNLWRRQLGRQQGIHWLYQERKQQLQYQQDRQEQKQLDDLAGRYATT
Sequences:
>Translated_137_residues MKQLLKLCQQEEKKLGQLGLQRNNAQTRINDIEQQKQLLSQMVSDYTQFSVKGGTAMMLQNSAQMIQVIEPMQKQLLRKQ LLLQQEHQRMDNLWRRQLGRQQGIHWLYQERKQQLQYQQDRQEQKQLDDLAGRYATT >Mature_137_residues MKQLLKLCQQEEKKLGQLGLQRNNAQTRINDIEQQKQLLSQMVSDYTQFSVKGGTAMMLQNSAQMIQVIEPMQKQLLRKQ LLLQQEHQRMDNLWRRQLGRQQGIHWLYQERKQQLQYQQDRQEQKQLDDLAGRYATT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16427; Mature: 16427
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLLKLCQQEEKKLGQLGLQRNNAQTRINDIEQQKQLLSQMVSDYTQFSVKGGTAMMLQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NSAQMIQVIEPMQKQLLRKQLLLQQEHQRMDNLWRRQLGRQQGIHWLYQERKQQLQYQQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQEQKQLDDLAGRYATT HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKQLLKLCQQEEKKLGQLGLQRNNAQTRINDIEQQKQLLSQMVSDYTQFSVKGGTAMMLQ CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NSAQMIQVIEPMQKQLLRKQLLLQQEHQRMDNLWRRQLGRQQGIHWLYQERKQQLQYQQD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQEQKQLDDLAGRYATT HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA