| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157959884
Identifier: 157959884
GI number: 157959884
Start: 69114
End: 69545
Strand: Reverse
Name: 157959884
Synonym: Spea_0054
Alternate gene names: NA
Gene position: 69545-69114 (Counterclockwise)
Preceding gene: 157959885
Following gene: 157959883
Centisome position: 1.34
GC content: 36.81
Gene sequence:
>432_bases GTGGACAAACCAATAGTTCAGCACAGTGAGTTTATTCCTGCCGACAAGGCAGCTAAAGAGAAAACCGACAGCATAGAAAG TCGACAACATATAAGACTGAATCTCAGACTAGATGCTGATGAAGACATTATGTTTGCCTGCGACGGCATCACAGTGCCTT TGATTGATAATCACCGCTGGTTCGAAAAACTTATTGGCATTGCCAATATAAAAGATATAGGGCTGGGAGGACTCGGACTG ATTACTAGCTGTAATCTGAAAGTAAACCAAAAAATATGCTTATCGATTAATAATGAATTGGTCCCAATTACAATTATGCG AATAAAGAAAGTAAATGGAAAACTTAACTTTATCGGTGCAAAATGGGATATCGAAGACGAACAAAAAATCATCTCAGTTT TAAATAAAATCTACAAACTGAGCAAATCTTAA
Upstream 100 bases:
>100_bases TGACAGGATTACCAGAAGAAAGTATTGCCCCCAGTAAAGCGGTTACAGACGCGAAAAAAATTGCAGAAGCGAATCAACCT AGATCGAGATACCCAGAGTC
Downstream 100 bases:
>100_bases ATGAGTAATCATTTAGATTACTTAGGCCTTATATACTTGAGGAAATAACGGTGCCTAATTCATATGTTAGAAAAGGAGTC GATGGTTTACAGAAAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS
Sequences:
>Translated_143_residues MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS >Mature_143_residues MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16153; Mature: 16153
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRW CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCHH FEKLIGIANIKDIGLGGLGLITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGA HHHHHCCCCCCCCCCCCCCEEEECCEEECCEEEEEECCCEEEEEEEEEEECCCEEEEEEE KWDIEDEQKIISVLNKIYKLSKS ECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRW CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCHH FEKLIGIANIKDIGLGGLGLITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGA HHHHHCCCCCCCCCCCCCCEEEECCEEECCEEEEEECCCEEEEEEEEEEECCCEEEEEEE KWDIEDEQKIISVLNKIYKLSKS ECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA