Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157959884

Identifier: 157959884

GI number: 157959884

Start: 69114

End: 69545

Strand: Reverse

Name: 157959884

Synonym: Spea_0054

Alternate gene names: NA

Gene position: 69545-69114 (Counterclockwise)

Preceding gene: 157959885

Following gene: 157959883

Centisome position: 1.34

GC content: 36.81

Gene sequence:

>432_bases
GTGGACAAACCAATAGTTCAGCACAGTGAGTTTATTCCTGCCGACAAGGCAGCTAAAGAGAAAACCGACAGCATAGAAAG
TCGACAACATATAAGACTGAATCTCAGACTAGATGCTGATGAAGACATTATGTTTGCCTGCGACGGCATCACAGTGCCTT
TGATTGATAATCACCGCTGGTTCGAAAAACTTATTGGCATTGCCAATATAAAAGATATAGGGCTGGGAGGACTCGGACTG
ATTACTAGCTGTAATCTGAAAGTAAACCAAAAAATATGCTTATCGATTAATAATGAATTGGTCCCAATTACAATTATGCG
AATAAAGAAAGTAAATGGAAAACTTAACTTTATCGGTGCAAAATGGGATATCGAAGACGAACAAAAAATCATCTCAGTTT
TAAATAAAATCTACAAACTGAGCAAATCTTAA

Upstream 100 bases:

>100_bases
TGACAGGATTACCAGAAGAAAGTATTGCCCCCAGTAAAGCGGTTACAGACGCGAAAAAAATTGCAGAAGCGAATCAACCT
AGATCGAGATACCCAGAGTC

Downstream 100 bases:

>100_bases
ATGAGTAATCATTTAGATTACTTAGGCCTTATATACTTGAGGAAATAACGGTGCCTAATTCATATGTTAGAAAAGGAGTC
GATGGTTTACAGAAAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL
ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS

Sequences:

>Translated_143_residues
MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL
ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS
>Mature_143_residues
MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRWFEKLIGIANIKDIGLGGLGL
ITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGAKWDIEDEQKIISVLNKIYKLSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16153; Mature: 16153

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRW
CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCHH
FEKLIGIANIKDIGLGGLGLITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGA
HHHHHCCCCCCCCCCCCCCEEEECCEEECCEEEEEECCCEEEEEEEEEEECCCEEEEEEE
KWDIEDEQKIISVLNKIYKLSKS
ECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKPIVQHSEFIPADKAAKEKTDSIESRQHIRLNLRLDADEDIMFACDGITVPLIDNHRW
CCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCEEEEEECCCHH
FEKLIGIANIKDIGLGGLGLITSCNLKVNQKICLSINNELVPITIMRIKKVNGKLNFIGA
HHHHHCCCCCCCCCCCCCCEEEECCEEECCEEEEEECCCEEEEEEEEEEECCCEEEEEEE
KWDIEDEQKIISVLNKIYKLSKS
ECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA