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The map label for this gene is trkA [H]

Identifier: 157959858

GI number: 157959858

Start: 30910

End: 32319

Strand: Reverse

Name: trkA [H]

Synonym: Spea_0028

Alternate gene names: 157959858

Gene position: 32319-30910 (Counterclockwise)

Preceding gene: 157959859

Following gene: 157959857

Centisome position: 0.62

GC content: 48.09

Gene sequence:

>1410_bases
ATGAAAATTATCATTTTGGGTGCAGGACAAGTTGGCGGCACATTAGCCGAAAACTTAGTTGGCGAAAACAATGACATCAC
CATTGTCGATAATGACAAAAATCGCCTGCGTACTTTGCAAGATAAGTACGATTTAAGGGTGGTCGTGGGTCACGGTGCTC
ACCCAAGTGTATTAAAAGAGGCGGGAGCCGAAGACGCTGATATGCTGATCGCGGTGACCAATAGTGACGAATGTAATATG
GCCGCATGTCAGATTGCCTACTCGCTCTATGGTACTCCCACCAAAATTGCCCGAATTCGTTCAGAACAATACCTAGGTTT
GCGCGACAAGCTGTTTATCGACAGCGAAACCAAAAATGCAGACAATCGCCCGCGAGGCGGCTTTATTATTGATGAGCTGA
TTGCACCAGAGCAACTAGTCACCGCTTATATCGGCCGCCTAGTTGAATACCCTGGTGCACTACAAGTGCTGGAGTTTGCT
GAAGGCCGACTTAGTCTCGTGGCCGTTCGTGCATACTATGGTGGCCCATTAGTGGGTAACGCCTTAGCTGCTTTACGTGA
ACATATGCCCAATATTGATACCCGGGTCGCGGCCATTTTTAGACAAGGTCGCCCTATTATGCCCCGCGGTACCACGATTA
TCGAAGCCGATGACGAAGTCTTCTTCGTTGCCGACAGCCGCCATGTGCGTGCGGTAATGAGTGAGATGCAAAAGCTAGAT
AACTCCTACCGCAACATTATGATTGCCGGCGGTGGTAATATCGGTTTAGGCCTAGCGAAGCAATTGCAACGTAACCATTC
AGTGAAGCTGATTGAGCGTAAGCAAGAACGCGCCGAAGAGTTATCAGAAAAGCTTGAGAACACCACGGTATTTTGTGGTG
ATGCATCGGATCAAGAGTTGTTACTCGAAGAACATATCGACCAAACAGATGTGTTTATTGCGGTGACTAACGACGATGAA
GCCAATATCATGGCCGCCTTGCTCGCCAAGCGTATGGGGGCGAAGAAAGTCATGGTGCTGATCCAGCGTGAAGCCTATGT
TGATATCGTGCAAGAAGCCAATATCGATATCGCCATCTCACCGCAGCAAGCAACCATCTCAGCGCTACTAACCCATATTC
GCCAAGGTGATATTTGTAACGTTTACTCACTGCGTCGCGGTGCAGCAGAGGCCATCGAAGCGATTGCTCACGGTGACTCT
AATACATCTAAAGTTGTGGGTAAGCAGATCAGCGAAATCAAACTGCCACCCGGCACCACCATTGGCGCTATCGTGCGTGA
TGAAGAAGTACTGATGGCCCACGATAAAACCGTTATCGAACAAGGTGATCACGTCATCCTCTTCTTAGTAAACAAGAAGT
TTATTGGTGAAGTTGAGAAACTGTTCCAACCGAGTGCTTTCTTCTTTTAA

Upstream 100 bases:

>100_bases
GAGCAAGCCAACCCAGACGATATCGGCTGGCAGATTGTTCCAGGACAAGACAACATGGACGGCTTTTATTACGCTCGCCT
AGTGAAGGATTAGAACGGCA

Downstream 100 bases:

>100_bases
AAAACCTTCAGGAGCGGAATAGTGCTGAACTATCGTCCTCTACTGTTTATTCTGGGAATTTTCCTATCGACGCTGACCGC
GTTTATGTTAATTCCCGGAG

Product: potassium transporter peripheral membrane component

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDNDKNRLRTLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSEKLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF

Sequences:

>Translated_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDNDKNRLRTLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSEKLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
>Mature_469_residues
MKIIILGAGQVGGTLAENLVGENNDITIVDNDKNRLRTLQDKYDLRVVVGHGAHPSVLKEAGAEDADMLIAVTNSDECNM
AACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNADNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFA
EGRLSLVAVRAYYGGPLVGNALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSEKLENTTVFCGDASDQELLLEEHIDQTDVFIAVTNDDE
ANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAISPQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDS
NTSKVVGKQISEIKLPPGTTIGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK N-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=469, Percent_Identity=70.7889125799574, Blast_Score=682, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 51548; Mature: 51548

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDNDKNRLRTLQDKYDLRVVVGHGAHPSVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMAACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNA
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSEKLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSNTSKVVGKQISEIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCE
IGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
EEEEEECCCEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKIIILGAGQVGGTLAENLVGENNDITIVDNDKNRLRTLQDKYDLRVVVGHGAHPSVLKE
CEEEEEECCCCCHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCCEEEEEECCCCHHHHHH
AGAEDADMLIAVTNSDECNMAACQIAYSLYGTPTKIARIRSEQYLGLRDKLFIDSETKNA
CCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCC
DNRPRGGFIIDELIAPEQLVTAYIGRLVEYPGALQVLEFAEGRLSLVAVRAYYGGPLVGN
CCCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEEEHHCCCHHHH
ALAALREHMPNIDTRVAAIFRQGRPIMPRGTTIIEADDEVFFVADSRHVRAVMSEMQKLD
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCHHHHHHHHHHHHHC
NSYRNIMIAGGGNIGLGLAKQLQRNHSVKLIERKQERAEELSEKLENTTVFCGDASDQEL
CHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHH
LLEEHIDQTDVFIAVTNDDEANIMAALLAKRMGAKKVMVLIQREAYVDIVQEANIDIAIS
HHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHCCEEEEEC
PQQATISALLTHIRQGDICNVYSLRRGAAEAIEAIAHGDSNTSKVVGKQISEIKLPPGTT
CCHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCE
IGAIVRDEEVLMAHDKTVIEQGDHVILFLVNKKFIGEVEKLFQPSAFFF
EEEEEECCCEEEECCHHHHHCCCEEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7948029; 9720051 [H]