| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826313
Identifier: 157826313
GI number: 157826313
Start: 1165200
End: 1165517
Strand: Direct
Name: 157826313
Synonym: A1C_06510
Alternate gene names: NA
Gene position: 1165200-1165517 (Clockwise)
Preceding gene: 157826308
Following gene: 157826314
Centisome position: 94.65
GC content: 22.01
Gene sequence:
>318_bases ATGGATAAATTCTATAATTATAACTCTTCTTTACATCAGGTATTACTTAATCTTAAAGTAAAGCCTAATTCTAAACAAAA TCTAATTAGTAATTTTGTAATTATCAATAATATTCCATATCTAAAATTATCTATAAAAGCAACACCGGAAAAAGGTAAAG CTAATGAAGAAATCATAAATTATTTAGCAAAAGCATGGAAATTATCACGTAGTAATATCGAAATTATTAAAGGTCATACT CATAGCGTAAAAACGATATTGATAAAAAATATTAATGAAGACTATTTAAATTTTATTATTAATTCCTATATTAGATAG
Upstream 100 bases:
>100_bases GGTGCTAACATTTACGGTGAACTTTATATCAGTTTAAGCAAACTTTTTCAAGTATTCTTTTTTGATTAAAAATAATAAGC AAATATGATAAAAAATATTC
Downstream 100 bases:
>100_bases GGTGCAGTTGTTGCTAGGCTGCCGATGTCATTCACGCGTAGGCGGTCATTTTATTAATTATAAAATTCCATAATAAGATA TTTTTAATGTTCTTTTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MDKFYNYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIINYLAKAWKLSRSNIEIIKGHT HSVKTILIKNINEDYLNFIINSYIR
Sequences:
>Translated_105_residues MDKFYNYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIINYLAKAWKLSRSNIEIIKGHT HSVKTILIKNINEDYLNFIINSYIR >Mature_105_residues MDKFYNYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIINYLAKAWKLSRSNIEIIKGHT HSVKTILIKNINEDYLNFIINSYIR
Specific function: Unknown
COG id: COG1872
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0235 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003746 [H]
Pfam domain/function: PF02594 DUF167 [H]
EC number: NA
Molecular weight: Translated: 12218; Mature: 12218
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKFYNYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIIN CCCCCCCCHHHHHHHHHCEECCCCHHHHHHCEEEECCCCEEEEEEEECCCCCCCHHHHHH YLAKAWKLSRSNIEIIKGHTHSVKTILIKNINEDYLNFIINSYIR HHHHHHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure MDKFYNYNSSLHQVLLNLKVKPNSKQNLISNFVIINNIPYLKLSIKATPEKGKANEEIIN CCCCCCCCHHHHHHHHHCEECCCCHHHHHHCEEEECCCCEEEEEEEECCCCCCCHHHHHH YLAKAWKLSRSNIEIIKGHTHSVKTILIKNINEDYLNFIINSYIR HHHHHHHCCCCCEEEEECCCCCEEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA