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The map label for this gene is ftsY [H]

Identifier: 157826227

GI number: 157826227

Start: 1068315

End: 1069226

Strand: Direct

Name: ftsY [H]

Synonym: A1C_06030

Alternate gene names: 157826227

Gene position: 1068315-1069226 (Clockwise)

Preceding gene: 157826226

Following gene: 157826228

Centisome position: 86.78

GC content: 35.31

Gene sequence:

>912_bases
ATGATTTCGATATTTAGCAAATTAAAACAAAGTTTATCTAAAACTTCTAATAAAATATCGGAAGGTATAGACAAAATATT
TTACAAGAAAAAATTAGATACAGAAACTTTAGAAGAGCTTGAAGAACTACTGATTGCAAGTGATATGAGCATTTCGGTAG
TAACTAATATTATTGAAGAGTTTAAAAAGGTAAAATTTGACAAAGAAATAGATAGTGATACAGTAAAAGAAGCCCTAGCT
GAATTAATAGAGCAGCAGCTATCAAAAGCAGAAATTCCTTTTACACTAAACGAAAATAAATTAAACGTAATTTTAGTTTG
CGGTGTTAATGGAGCAGGTAAAACCACCACTATAGGTAAGCTTGCTGCCATGTACTCAGCACAAGGCAAAAAAGTAGCGG
TTGCGGCCTGTGATACTTTTAGAGCAGCTGCCGTGAATCAGCTAAGCAGTTGGGTAGATAGAGCAAATGCACTACTTATT
ACTGGTGAAGAATCGGCTGACCCTGCGAGTGTTGCTTACCGTGCTATGGAAGAGTCAATAAAACAAAATATAGATATGCT
GTTTCTTGACACAGCAGGTAGGCTTCATAATAAGAAAAATTTGATGGATGAACTGTCTAAGATTGTAAAAGTTATAACAA
AACTAGACGGGCATGCTCATACTCATAGCATTTTAGTAATTGATGCTATTACAGGACAAAATACTTATAACCAAATCGAG
CATTTTAACAATGCTACTAATTTGACAGGGCTTATCGTGACTAAACTCGACGGTAGTGCTAAAGCCGGAGTGCTTGTCGG
AGTGGTACAGAAATTTAATCTACCTGTATACTTTATCGGTATAGGCGAGAAGATAGAAGACTTAAAAATATTCCACCGAC
ATGATTTTGCTAAAAGTCTAGTGGGGTTGTAA

Upstream 100 bases:

>100_bases
TAATAATACTTGATAAACCTATAAAAACAAGTTTTTATAGGTTTATCTGGATTCCCGCCTACATGGGAATCCAGTCATTA
CAAAACAAAAACTATCCAAT

Downstream 100 bases:

>100_bases
TGTTTTGCTGCGTGTGTGGGTACCGAGCCGTCATTGCAAGCATCCGTATGGCTGCACAGCAATCCAATACAAGTCATAAA
AAACTCCTGAGATTGCTTCG

Product: Signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDTETLEELEELLIASDMSISVVTNIIEEFKKVKFDKEIDSDTVKEALA
ELIEQQLSKAEIPFTLNENKLNVILVCGVNGAGKTTTIGKLAAMYSAQGKKVAVAACDTFRAAAVNQLSSWVDRANALLI
TGEESADPASVAYRAMEESIKQNIDMLFLDTAGRLHNKKNLMDELSKIVKVITKLDGHAHTHSILVIDAITGQNTYNQIE
HFNNATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFHRHDFAKSLVGL

Sequences:

>Translated_303_residues
MISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDTETLEELEELLIASDMSISVVTNIIEEFKKVKFDKEIDSDTVKEALA
ELIEQQLSKAEIPFTLNENKLNVILVCGVNGAGKTTTIGKLAAMYSAQGKKVAVAACDTFRAAAVNQLSSWVDRANALLI
TGEESADPASVAYRAMEESIKQNIDMLFLDTAGRLHNKKNLMDELSKIVKVITKLDGHAHTHSILVIDAITGQNTYNQIE
HFNNATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFHRHDFAKSLVGL
>Mature_303_residues
MISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDTETLEELEELLIASDMSISVVTNIIEEFKKVKFDKEIDSDTVKEALA
ELIEQQLSKAEIPFTLNENKLNVILVCGVNGAGKTTTIGKLAAMYSAQGKKVAVAACDTFRAAAVNQLSSWVDRANALLI
TGEESADPASVAYRAMEESIKQNIDMLFLDTAGRLHNKKNLMDELSKIVKVITKLDGHAHTHSILVIDAITGQNTYNQIE
HFNNATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFHRHDFAKSLVGL

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=272, Percent_Identity=30.5147058823529, Blast_Score=124, Evalue=9e-29,
Organism=Homo sapiens, GI226371618, Length=210, Percent_Identity=32.8571428571429, Blast_Score=122, Evalue=4e-28,
Organism=Homo sapiens, GI23308697, Length=289, Percent_Identity=27.681660899654, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI295424842, Length=289, Percent_Identity=27.681660899654, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI89061728, Length=137, Percent_Identity=30.6569343065693, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=44.8504983388704, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI1788963, Length=306, Percent_Identity=31.3725490196078, Blast_Score=144, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=272, Percent_Identity=29.4117647058824, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=205, Percent_Identity=31.219512195122, Blast_Score=94, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6325345, Length=236, Percent_Identity=34.7457627118644, Blast_Score=139, Evalue=6e-34,
Organism=Saccharomyces cerevisiae, GI6320498, Length=216, Percent_Identity=30.5555555555556, Blast_Score=93, Evalue=5e-20,
Organism=Drosophila melanogaster, GI17647949, Length=277, Percent_Identity=29.2418772563177, Blast_Score=121, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24641198, Length=258, Percent_Identity=29.8449612403101, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 33285; Mature: 33285

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDTETLEELEELLIASDMSISVVTNIIEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
FKKVKFDKEIDSDTVKEALAELIEQQLSKAEIPFTLNENKLNVILVCGVNGAGKTTTIGK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHHH
LAAMYSAQGKKVAVAACDTFRAAAVNQLSSWVDRANALLITGEESADPASVAYRAMEESI
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH
KQNIDMLFLDTAGRLHNKKNLMDELSKIVKVITKLDGHAHTHSILVIDAITGQNTYNQIE
HCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHH
HFNNATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFHRHDFAKSL
HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH
VGL
HCC
>Mature Secondary Structure
MISIFSKLKQSLSKTSNKISEGIDKIFYKKKLDTETLEELEELLIASDMSISVVTNIIEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
FKKVKFDKEIDSDTVKEALAELIEQQLSKAEIPFTLNENKLNVILVCGVNGAGKTTTIGK
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEECCCCCCCCHHHHH
LAAMYSAQGKKVAVAACDTFRAAAVNQLSSWVDRANALLITGEESADPASVAYRAMEESI
HHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHH
KQNIDMLFLDTAGRLHNKKNLMDELSKIVKVITKLDGHAHTHSILVIDAITGQNTYNQIE
HCCCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHH
HFNNATNLTGLIVTKLDGSAKAGVLVGVVQKFNLPVYFIGIGEKIEDLKIFHRHDFAKSL
HHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH
VGL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]