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The map label for this gene is omp16 [H]

Identifier: 157826223

GI number: 157826223

Start: 1065617

End: 1066084

Strand: Reverse

Name: omp16 [H]

Synonym: A1C_06010

Alternate gene names: 157826223

Gene position: 1066084-1065617 (Counterclockwise)

Preceding gene: 157826224

Following gene: 157826222

Centisome position: 86.6

GC content: 34.83

Gene sequence:

>468_bases
ATGAAAACAAAAATTACATTAGCTTTTCTTGCATTATTTGTGCTTGCAGGGTGTAATACAACAAAAAGAACCGTAAAAAT
GGATGGTATGATGAGTCAGTGTGAAGAAACATCATTAATGAAAGATTTCGAGAAACATGCAGGTAATGCTGTATGGTTTG
CTTTTGATAGTTCTTCTTTATCTCCAAAAGCTAAAGAAGAACTAGAAAGACAAGCTTGCTGGTTATCAAAGCATCCTGAA
GTAAAAGCTACTGTGGAAGGACATTGCGATGAAAGAGGTACCAGAGAGTATAATTTAGGTTTAGGTGAAAGAAGAGCAGA
AGCAGCAAAAAAATTCTTAGTTCATAAAGGAATCGACCATAGCAGATTAAATACCATCTCTTATGGTAAAGATAGACCTG
CTATGATTGGTAATACTGAAGAAGCTTTTGCTTATAATCGTAGAGCTGTAACAGTTGTACATCACTAA

Upstream 100 bases:

>100_bases
ATGATATATACTAACTGACATAGCTTTTGGTTATGTGTAGTTTTATAACTAGCTAAAATGAATTCAATATTAATAAATTA
TAATCTCAAGGAGTTTAATT

Downstream 100 bases:

>100_bases
AATTATTTACTGGTTATAGTATCCTAAAAGGTCGAGTTTACTACTCGGCTTTCTTTGTTTATACGTGGATACCAAATTGT
CATTGTAGGCAGCAATAGGC

Product: peptidoglycan-associated lipoprotein precursor

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSSLSPKAKEELERQACWLSKHPE
VKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGIDHSRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVVHH

Sequences:

>Translated_155_residues
MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSSLSPKAKEELERQACWLSKHPE
VKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGIDHSRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVVHH
>Mature_155_residues
MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSSLSPKAKEELERQACWLSKHPE
VKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGIDHSRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVVHH

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=138, Percent_Identity=39.8550724637681, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17463; Mature: 17463

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSSL
CCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
SPKAKEELERQACWLSKHPEVKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGIDH
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCC
SRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVVHH
HHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEC
>Mature Secondary Structure
MKTKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSSL
CCCCHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC
SPKAKEELERQACWLSKHPEVKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGIDH
CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCC
SRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVVHH
HHCCCCCCCCCCCCCCCCCHHHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]