| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826169
Identifier: 157826169
GI number: 157826169
Start: 1019148
End: 1019399
Strand: Reverse
Name: 157826169
Synonym: A1C_05730
Alternate gene names: NA
Gene position: 1019399-1019148 (Counterclockwise)
Preceding gene: 157826170
Following gene: 157826165
Centisome position: 82.81
GC content: 33.33
Gene sequence:
>252_bases ATGAGTATACATTTTAAGTTGACAAGTTTTTGTTTACTTCATAATATCCAGTCTCAATTTGATAAAGGTAAATTTATGCG TTCAGCATTTATAACTTCTATATTTGTAGCTGTAGCTTTCTTAACAAGTGCATGTAATACAATGCAAGGAGCTGGTCAAG ATATGCAAGCGGAAGGTAAAAAACTTGAGGATTCAGCAAAAAGCAATAAGAGTACAAAAGGTTGTGGATGTTCTCACAGC TCAGCTAACTAA
Upstream 100 bases:
>100_bases AAAAGAGCAAGGAGTCTATAAGTCGAGGAACTGGGCCTATACTTAATACGTGAGTACCGCAGATCTTATAAGACGATGTA GCCAATTTTTGAAGCTCTAT
Downstream 100 bases:
>100_bases TTTGTAATAGGTCGTCTGATATATCACAGGCGACCTTTTATTTTTCTACCTTATCAATTTCTGCTTTTAGTTTTTCTATT TCCTATGTAGTTAACCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MSIHFKLTSFCLLHNIQSQFDKGKFMRSAFITSIFVAVAFLTSACNTMQGAGQDMQAEGKKLEDSAKSNKSTKGCGCSHS SAN
Sequences:
>Translated_83_residues MSIHFKLTSFCLLHNIQSQFDKGKFMRSAFITSIFVAVAFLTSACNTMQGAGQDMQAEGKKLEDSAKSNKSTKGCGCSHS SAN >Mature_82_residues SIHFKLTSFCLLHNIQSQFDKGKFMRSAFITSIFVAVAFLTSACNTMQGAGQDMQAEGKKLEDSAKSNKSTKGCGCSHSS AN
Specific function: Unknown
COG id: COG5510
COG function: function code S; Predicted small secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8957; Mature: 8826
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHFKLTSFCLLHNIQSQFDKGKFMRSAFITSIFVAVAFLTSACNTMQGAGQDMQAEGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC KLEDSAKSNKSTKGCGCSHSSAN HHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SIHFKLTSFCLLHNIQSQFDKGKFMRSAFITSIFVAVAFLTSACNTMQGAGQDMQAEGK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC KLEDSAKSNKSTKGCGCSHSSAN HHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA