| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157826148
Identifier: 157826148
GI number: 157826148
Start: 999949
End: 1001256
Strand: Reverse
Name: 157826148
Synonym: A1C_05625
Alternate gene names: NA
Gene position: 1001256-999949 (Counterclockwise)
Preceding gene: 157826149
Following gene: 157826146
Centisome position: 81.33
GC content: 31.42
Gene sequence:
>1308_bases ATGCCTATATTTGCAAATGAAATGGTGAGTAGCTTACCTGGCAATACAAAACATATTATTTATAAGTTAGGCGATACTAT ATTTTCATCAGTATATAATACTGTTAAAGGAAGTTTCACTAACGGTTATTTCGTTGAGCATATGGAATGTAATTGGGTAG GAATCTCTAATCATTTAACAGATGTACCTAACGATTTATCAGCAGTAATTAGCGAGTGTACAGGCATTAAAATTCCTATA AAATCTATTGTCACTTATGGAAACAATACTAGCCTTATTTTAGAAGAAGGTAAGCACTTACTGCAAAACGCTACCTTAGT AGAATTAAGTGAATGCACTACCAATGCATGCGAAGCTATTTTGCAAGAGCATAATGCAAAAATGCTTGTTAATCATTTGA GAGATATTTTTAATAATGAGGAAATAACTTTGAACAATGCTCAAGAAGCAGGGGTAGACATTTTTAATTTATTAAATATA CCAATCACATTCACTACTGATAATCTTAAGGTTATTCTAGATTATTTCAACGTAACGTTGGACGCTAGATCCACTACAGC ACTAGGTAACAATATTTTAGATTTACTGAGTAAACCTTTCACTGAGGCAATCACTGCCACTACAGAAAAACCTAACGATG AAACAAATGGCGGTGGATATACCGGTGCTTATATCACCGCTACGGTATTTGGAATAATAAGTCTAGGTTTTGCAGCTAAA TATGGATGGGATTGGTATACGTTGGGGGATATAAAAGATAAAAATTTAGAGTTAGAGGGTGAAAACATAAGGTTAGAGGG TGAAAACATAAAGTTACAAAAGGATAATATAAATCTTAGCACACTAATTGAATTTCAAGCTATATTAGATGAAATGATAG ACATTGGAAATTTAACAGATATACTTGCAATACTAAGCAACACTCAGCAAGATACGATAAATTTACATGGTCAAGATTAT GATATGTTTCTATTAAAATCAAAAATACAAGGTCTAGATAAAGCAATTACAAAATTAAATTCTGTCTCTAACATATGTGT TAATATAAATTCCTTAGGTAACACATTACATAAAATATGTGATCTTCTTAATGGAAAGGATAATTTTATTGCTATTAAAT CTTTTACGAATTTAATAAAAGAATCGAGGAAAATGGATATTCAATCCGAAGAACACAAAAACTGTCTTGAGAAAATATTC GAGACGATACTTGAAATTGATGAAACCTCAAGCGGAGTATATACTTATATTCCAGAGTTACCAGATCATGAAATGTCATT ATTAGCTGATGTCTCATCAGCTCTTTAG
Upstream 100 bases:
>100_bases TACATTAACATACTCTAGAAAGCACGCTTTGTGGTTTTATTAATTAAGTTAAAGGAGTAACATGATGGCGCCTATATTCA GTATAAACTTAAACTGTTTC
Downstream 100 bases:
>100_bases GCATAGTAGTATAGAACGTTGTTGGTATAATAACAAACAATCATTGACTTGAAAGTTGTATATAAAATGACACTTGGAGT AGCAAAGTGCTATTTCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPIFANEMVSSLPGNTKHIIYKLGDTIFSSVYNTVKGSFTNGYFVEHMECNWVGISNHLTDVPNDLSAVISECTGIKIPI KSIVTYGNNTSLILEEGKHLLQNATLVELSECTTNACEAILQEHNAKMLVNHLRDIFNNEEITLNNAQEAGVDIFNLLNI PITFTTDNLKVILDYFNVTLDARSTTALGNNILDLLSKPFTEAITATTEKPNDETNGGGYTGAYITATVFGIISLGFAAK YGWDWYTLGDIKDKNLELEGENIRLEGENIKLQKDNINLSTLIEFQAILDEMIDIGNLTDILAILSNTQQDTINLHGQDY DMFLLKSKIQGLDKAITKLNSVSNICVNINSLGNTLHKICDLLNGKDNFIAIKSFTNLIKESRKMDIQSEEHKNCLEKIF ETILEIDETSSGVYTYIPELPDHEMSLLADVSSAL
Sequences:
>Translated_435_residues MPIFANEMVSSLPGNTKHIIYKLGDTIFSSVYNTVKGSFTNGYFVEHMECNWVGISNHLTDVPNDLSAVISECTGIKIPI KSIVTYGNNTSLILEEGKHLLQNATLVELSECTTNACEAILQEHNAKMLVNHLRDIFNNEEITLNNAQEAGVDIFNLLNI PITFTTDNLKVILDYFNVTLDARSTTALGNNILDLLSKPFTEAITATTEKPNDETNGGGYTGAYITATVFGIISLGFAAK YGWDWYTLGDIKDKNLELEGENIRLEGENIKLQKDNINLSTLIEFQAILDEMIDIGNLTDILAILSNTQQDTINLHGQDY DMFLLKSKIQGLDKAITKLNSVSNICVNINSLGNTLHKICDLLNGKDNFIAIKSFTNLIKESRKMDIQSEEHKNCLEKIF ETILEIDETSSGVYTYIPELPDHEMSLLADVSSAL >Mature_434_residues PIFANEMVSSLPGNTKHIIYKLGDTIFSSVYNTVKGSFTNGYFVEHMECNWVGISNHLTDVPNDLSAVISECTGIKIPIK SIVTYGNNTSLILEEGKHLLQNATLVELSECTTNACEAILQEHNAKMLVNHLRDIFNNEEITLNNAQEAGVDIFNLLNIP ITFTTDNLKVILDYFNVTLDARSTTALGNNILDLLSKPFTEAITATTEKPNDETNGGGYTGAYITATVFGIISLGFAAKY GWDWYTLGDIKDKNLELEGENIRLEGENIKLQKDNINLSTLIEFQAILDEMIDIGNLTDILAILSNTQQDTINLHGQDYD MFLLKSKIQGLDKAITKLNSVSNICVNINSLGNTLHKICDLLNGKDNFIAIKSFTNLIKESRKMDIQSEEHKNCLEKIFE TILEIDETSSGVYTYIPELPDHEMSLLADVSSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020182 - ProDom: PD215945 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48277; Mature: 48146
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFANEMVSSLPGNTKHIIYKLGDTIFSSVYNTVKGSFTNGYFVEHMECNWVGISNHLT CCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCC DVPNDLSAVISECTGIKIPIKSIVTYGNNTSLILEEGKHLLQNATLVELSECTTNACEAI CCCHHHHHHHHHHCCCEEEHHHHHEECCCCEEEEHHHHHHHCCCCEEEHHHHHHHHHHHH LQEHNAKMLVNHLRDIFNNEEITLNNAQEAGVDIFNLLNIPITFTTDNLKVILDYFNVTL HHHCCHHHHHHHHHHHHCCCCEEECCCHHCCCCEEEHCCCCEEEECCCCEEEEEECCEEE DARSTTALGNNILDLLSKPFTEAITATTEKPNDETNGGGYTGAYITATVFGIISLGFAAK CCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH YGWDWYTLGDIKDKNLELEGENIRLEGENIKLQKDNINLSTLIEFQAILDEMIDIGNLTD CCCCEEEECCCCCCCEEEECCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ILAILSNTQQDTINLHGQDYDMFLLKSKIQGLDKAITKLNSVSNICVNINSLGNTLHKIC HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH DLLNGKDNFIAIKSFTNLIKESRKMDIQSEEHKNCLEKIFETILEIDETSSGVYTYIPEL HHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC PDHEMSLLADVSSAL CCHHHHHHHHHHHCC >Mature Secondary Structure PIFANEMVSSLPGNTKHIIYKLGDTIFSSVYNTVKGSFTNGYFVEHMECNWVGISNHLT CCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCC DVPNDLSAVISECTGIKIPIKSIVTYGNNTSLILEEGKHLLQNATLVELSECTTNACEAI CCCHHHHHHHHHHCCCEEEHHHHHEECCCCEEEEHHHHHHHCCCCEEEHHHHHHHHHHHH LQEHNAKMLVNHLRDIFNNEEITLNNAQEAGVDIFNLLNIPITFTTDNLKVILDYFNVTL HHHCCHHHHHHHHHHHHCCCCEEECCCHHCCCCEEEHCCCCEEEECCCCEEEEEECCEEE DARSTTALGNNILDLLSKPFTEAITATTEKPNDETNGGGYTGAYITATVFGIISLGFAAK CCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH YGWDWYTLGDIKDKNLELEGENIRLEGENIKLQKDNINLSTLIEFQAILDEMIDIGNLTD CCCCEEEECCCCCCCEEEECCEEEEECCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHH ILAILSNTQQDTINLHGQDYDMFLLKSKIQGLDKAITKLNSVSNICVNINSLGNTLHKIC HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHH DLLNGKDNFIAIKSFTNLIKESRKMDIQSEEHKNCLEKIFETILEIDETSSGVYTYIPEL HHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC PDHEMSLLADVSSAL CCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]