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The map label for this gene is yebC [C]

Identifier: 157825896

GI number: 157825896

Start: 752197

End: 752955

Strand: Direct

Name: yebC [C]

Synonym: A1C_04175

Alternate gene names: 157825896

Gene position: 752197-752955 (Clockwise)

Preceding gene: 157825895

Following gene: 157825897

Centisome position: 61.1

GC content: 34.91

Gene sequence:

>759_bases
ATGGCCGGTCACTCAAAGTTTAAAAATATTCAGCATCGTAAATGTGCTCAAGATAAAAAAAGAGCAAAAGTTTTCACTAA
ATTAATTCGTGAAATAGTTACTGCAGTTAAAACTGGCTCTTCTAATATCCCTGAAAATAATCCGCGCCTTAGAAATGCTT
TAACCGCCGCACGCAGTCAAAATCTCCCAAAAGAAAGAATAGACAAAGCTATTAATAGTGCTGACGATGCTAATACTGAA
AATTATACGGAAATTAGATATGAAGGTTATGCACCGAACGGTATTGCTATAATAGTTGAAGCTTTAACCGATAATAAAAA
CCGTACTGCTGCTGAAGTGCGTTCCAGTTTTACCAAATACGGTGGCAGCTTAGGTGAAACGGGTAGCGTTAATTATTTAT
TTAAACATTGCGGAGTTATTCAGTATCCAACAAACATAGCATCGAATGAAGATATTTTTGAGGCAGCTATAGAAGCCGGA
GGGGATGATATCGTATCTGATGCAATATTCCATACAATCTGCACGGATATTGAAAATTTTTCTAAAGTTCTAGAATTTTT
AACCGGTAAATACGGTATACCTGAAGACTCTTATATAGGCTGGATTCCATTAAATACAATAATTATAGATGATACGGAAA
AAGCTGAAAAATTACTAAAGCTTGTAGAAGCTTTAGAAGAAAGCGACGATGTACAAAGAGTTTTCAGTAATTATGAATTC
TCCGATGATGTTTACGAAATAATACAAGGAGAAGAATGA

Upstream 100 bases:

>100_bases
AAGATTGTCAAATCGTCAAAAGAAGAGGCAAAATTTTTGTAATAAATAAAAAGAACAAAAGATTTAAAGCGAAACAAGGT
TAATTGTTTCTAGATGGAAT

Downstream 100 bases:

>100_bases
CTTATAGCGATGCAAATTATCAAATAATTATTTTAGCAGCCGGTAAAGGGACTAGAATGGAGTCCGATTTACCAAAAGTA
ATGCATAAAGTCGGCGGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAGHSKFKNIQHRKCAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQNLPKERIDKAINSADDANTE
NYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFKHCGVIQYPTNIASNEDIFEAAIEAG
GDDIVSDAIFHTICTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDTEKAEKLLKLVEALEESDDVQRVFSNYEF
SDDVYEIIQGEE

Sequences:

>Translated_252_residues
MAGHSKFKNIQHRKCAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQNLPKERIDKAINSADDANTE
NYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFKHCGVIQYPTNIASNEDIFEAAIEAG
GDDIVSDAIFHTICTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDTEKAEKLLKLVEALEESDDVQRVFSNYEF
SDDVYEIIQGEE
>Mature_251_residues
AGHSKFKNIQHRKCAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQNLPKERIDKAINSADDANTEN
YTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKYGGSLGETGSVNYLFKHCGVIQYPTNIASNEDIFEAAIEAGG
DDIVSDAIFHTICTDIENFSKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDTEKAEKLLKLVEALEESDDVQRVFSNYEFS
DDVYEIIQGEE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=29.3172690763052, Blast_Score=95, Evalue=5e-20,
Organism=Escherichia coli, GI1788171, Length=251, Percent_Identity=47.808764940239, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1788294, Length=243, Percent_Identity=35.8024691358025, Blast_Score=125, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=29.2682926829268, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=262, Percent_Identity=31.6793893129771, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24583305, Length=255, Percent_Identity=28.2352941176471, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4175_RICAH (A8GNY3)

Other databases:

- EMBL:   CP000847
- RefSeq:   YP_001493616.1
- ProteinModelPortal:   A8GNY3
- SMR:   A8GNY3
- STRING:   A8GNY3
- GeneID:   5645335
- GenomeReviews:   CP000847_GR
- KEGG:   rak:A1C_04175
- NMPDR:   fig|293614.3.peg.785
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   RAKA293614:A1C_04175-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 28126; Mature: 27994

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKFKNIQHRKCAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
NLPKERIDKAINSADDANTENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKY
CCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHH
GGSLGETGSVNYLFKHCGVIQYPTNIASNEDIFEAAIEAGGDDIVSDAIFHTICTDIENF
CCCCCCCCCHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDTEKAEKLLKLVEALEESDDVQRVFSNYEF
HHHHHHHHCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
SDDVYEIIQGEE
CHHHHHHHCCCC
>Mature Secondary Structure 
AGHSKFKNIQHRKCAQDKKRAKVFTKLIREIVTAVKTGSSNIPENNPRLRNALTAARSQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
NLPKERIDKAINSADDANTENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTKY
CCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHCCCCHHHHHHHHHHHHH
GGSLGETGSVNYLFKHCGVIQYPTNIASNEDIFEAAIEAGGDDIVSDAIFHTICTDIENF
CCCCCCCCCHHHHHHHCCEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
SKVLEFLTGKYGIPEDSYIGWIPLNTIIIDDTEKAEKLLKLVEALEESDDVQRVFSNYEF
HHHHHHHHCCCCCCCCCEEEEEECCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHCCCC
SDDVYEIIQGEE
CHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA