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The map label for this gene is ygfZ [C]

Identifier: 157825884

GI number: 157825884

Start: 742836

End: 743762

Strand: Reverse

Name: ygfZ [C]

Synonym: A1C_04115

Alternate gene names: 157825884

Gene position: 743762-742836 (Counterclockwise)

Preceding gene: 157825887

Following gene: 157825883

Centisome position: 60.42

GC content: 32.79

Gene sequence:

>927_bases
ATGTATGAAATATTAAGTAATAGAGAGATTATCAAAATAATAGGTTTAGATTCCGTAAAGTTTCTACAAAATCTTATTAC
TAACGATATTAAGAAAAGTCAGTATTGCTATACCTATTTACTTACTAATCAAGGAAGATATTTATTTGATTTTTTTGTGT
ATGTTCGCAACCTTGAGGAAATTTACCTTGATATTGATAAAAGTAATAAAGCTGCTTTGATAGAGCATTTAAACTTCTAT
AAATTGCGCTCTAAAATACAAATAATAGATTGTAGTGACGAATATAAAGTTATCTACTCACTTCAAAAATTAGATATAGA
CACACTAGTTACGTCTCGTGATCCTAGATATTCTATGCTTGGTTTTCGTTCTATAAATAAGTGCGGTGTCATACCGTGTT
TTGACTACGGTATCCAGAAAACAATTAAAAAAGACTGGACACCGTGTAGAAGCCACGTGGTGACAGAGATGGAATCGATC
CATGCAACACCCCACACCCAATGTTATTCCCGCGAAGGCGGGAATCCAGCCTCCTTATATCTAGAAGATAAATATAATTT
TGCAATAATAGATGGTGTAGAAGATTTAATTACAGATAAATCTATTCCTAATATGTACGGTGCTGAGGAGTTAAATGCAA
TTAGTTTTGACAAAGGCTGTTATGTCGGGCAGGAAGTTATTTCAAGAGCTAAATATCAAGGTGTTATAAGAAGAAAGATA
TATAAAATTACAGCAGATGAAGATTTATCCGCATTAGTGAAAGATGAAGAAATACTTGCAGGTAAGGATCAAATCGGTGT
AATATGCTCAAGTTACCGTAATAAAGCAATCGTCCTAATCAGAGAAGAAAAATACTTTGCTTGTAAAGAAGCTGACATTA
CTGTTAAAGGGATTAAAATAAACTTATCTCTCGCTCCTTGGTATTAG

Upstream 100 bases:

>100_bases
AGCAGTACAGTAAGATGAACATCTCATGATTATTAAGTTTAATTTATATAAATTTAGAGTATAGTGGTTAGGCACCTATA
AAGTCAATAACATTATAATT

Downstream 100 bases:

>100_bases
ATAATAGTTAAGCTTTTGATAATTTCTAGACCATAAATTTTGTAGTTTATTTTATAAAAAAAATTTTTGGAGCTATGATA
TCAAATCTTTCCCAACTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycine Cleavage T-Protein; Glycine Cleavage System T Protein Aminomethyltransferase; Glycine Cleavage T Protein; GcvT-Like Aminomethyltransferase Protein; Aminomethyltransferase; Aminomethyltransferase Protein; GcvT-Like Aminomethyltransferase

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MYEILSNREIIKIIGLDSVKFLQNLITNDIKKSQYCYTYLLTNQGRYLFDFFVYVRNLEEIYLDIDKSNKAALIEHLNFY
KLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLGFRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESI
HATPHTQCYSREGGNPASLYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKI
YKITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEKYFACKEADITVKGIKINLSLAPWY

Sequences:

>Translated_308_residues
MYEILSNREIIKIIGLDSVKFLQNLITNDIKKSQYCYTYLLTNQGRYLFDFFVYVRNLEEIYLDIDKSNKAALIEHLNFY
KLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLGFRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESI
HATPHTQCYSREGGNPASLYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKI
YKITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEKYFACKEADITVKGIKINLSLAPWY
>Mature_308_residues
MYEILSNREIIKIIGLDSVKFLQNLITNDIKKSQYCYTYLLTNQGRYLFDFFVYVRNLEEIYLDIDKSNKAALIEHLNFY
KLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSMLGFRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESI
HATPHTQCYSREGGNPASLYLEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKI
YKITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEKYFACKEADITVKGIKINLSLAPWY

Specific function: Unknown

COG id: COG0354

COG function: function code R; Predicted aminomethyltransferase related to GcvT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71985951, Length=308, Percent_Identity=26.6233766233766, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24645123, Length=327, Percent_Identity=27.217125382263, Blast_Score=111, Evalue=5e-25,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35554; Mature: 35554

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEILSNREIIKIIGLDSVKFLQNLITNDIKKSQYCYTYLLTNQGRYLFDFFVYVRNLEE
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCHHH
IYLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSML
EEEEECCCCCHHHHHHHHHHEECCEEEEEECCCCEEEEEEHHHCCHHHHCCCCCCCEEEE
GFRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLY
CCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEE
LEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKI
EECCCCEEEECCHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHE
YKITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEKYFACKEADITVKGIKI
EEEECCCHHHHHHCCCHHHCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEEEE
NLSLAPWY
EEEECCCC
>Mature Secondary Structure
MYEILSNREIIKIIGLDSVKFLQNLITNDIKKSQYCYTYLLTNQGRYLFDFFVYVRNLEE
CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHCHHH
IYLDIDKSNKAALIEHLNFYKLRSKIQIIDCSDEYKVIYSLQKLDIDTLVTSRDPRYSML
EEEEECCCCCHHHHHHHHHHEECCEEEEEECCCCEEEEEEHHHCCHHHHCCCCCCCEEEE
GFRSINKCGVIPCFDYGIQKTIKKDWTPCRSHVVTEMESIHATPHTQCYSREGGNPASLY
CCCCCCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEE
LEDKYNFAIIDGVEDLITDKSIPNMYGAEELNAISFDKGCYVGQEVISRAKYQGVIRRKI
EECCCCEEEECCHHHHHCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHE
YKITADEDLSALVKDEEILAGKDQIGVICSSYRNKAIVLIREEKYFACKEADITVKGIKI
EEEECCCHHHHHHCCCHHHCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEEEEE
NLSLAPWY
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA