| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825883
Identifier: 157825883
GI number: 157825883
Start: 742194
End: 742532
Strand: Reverse
Name: 157825883
Synonym: A1C_04110
Alternate gene names: NA
Gene position: 742532-742194 (Counterclockwise)
Preceding gene: 157825884
Following gene: 157825882
Centisome position: 60.32
GC content: 30.09
Gene sequence:
>339_bases ATGGTAATTTTATTAAAAAATTGTATTAAAACTGCATATCATAAAATGGGAAATTATAGTAGTACTATTTGGGATGGACG AGACAATAATGGTAATACTACAGCTCATTGGCTTGCTTGTGGCGGAGCTACCGGAGAACTTTATGGTTTATTAAATAAAC CCCTTGAGCTTATAGAAGATGAACAAAACTTTCACGTAATGTTTTTGATGTCACAATGGAAGTGGAGCATTTTAAACGTA GAACAGAAAAAAGCACTAGCTAAAGTTTTAATTCCTTTAGGCATACAAATCAATAACTTAATACATATAATATTATATTA CAACATAATGAATCTTTAG
Upstream 100 bases:
>100_bases TCTCCTTATGTAGCAATAAATCTTAATGCTTTAGAAGCTTTATGATTTATGAAGTCTGTACTCAATGTAACATCTAATAA TCAGCAGGAGATAAAAAGAT
Downstream 100 bases:
>100_bases AGTGTCTAACAGTATTACGGAAAATGCTAGTAATTTATCTCTAGCAATATTCACAGAATTTACAAACAATGCGATAACAA AAATAGGTCCTTTAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MVILLKNCIKTAYHKMGNYSSTIWDGRDNNGNTTAHWLACGGATGELYGLLNKPLELIEDEQNFHVMFLMSQWKWSILNV EQKKALAKVLIPLGIQINNLIHIILYYNIMNL
Sequences:
>Translated_112_residues MVILLKNCIKTAYHKMGNYSSTIWDGRDNNGNTTAHWLACGGATGELYGLLNKPLELIEDEQNFHVMFLMSQWKWSILNV EQKKALAKVLIPLGIQINNLIHIILYYNIMNL >Mature_112_residues MVILLKNCIKTAYHKMGNYSSTIWDGRDNNGNTTAHWLACGGATGELYGLLNKPLELIEDEQNFHVMFLMSQWKWSILNV EQKKALAKVLIPLGIQINNLIHIILYYNIMNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12834; Mature: 12834
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILLKNCIKTAYHKMGNYSSTIWDGRDNNGNTTAHWLACGGATGELYGLLNKPLELIED CEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHCC EQNFHVMFLMSQWKWSILNVEQKKALAKVLIPLGIQINNLIHIILYYNIMNL CCCEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVILLKNCIKTAYHKMGNYSSTIWDGRDNNGNTTAHWLACGGATGELYGLLNKPLELIED CEEEHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHCC EQNFHVMFLMSQWKWSILNVEQKKALAKVLIPLGIQINNLIHIILYYNIMNL CCCEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA