| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825873
Identifier: 157825873
GI number: 157825873
Start: 731189
End: 732217
Strand: Reverse
Name: 157825873
Synonym: A1C_04060
Alternate gene names: NA
Gene position: 732217-731189 (Counterclockwise)
Preceding gene: 157825874
Following gene: 157825865
Centisome position: 59.48
GC content: 29.64
Gene sequence:
>1029_bases ATGTTCAATAAGTTACGAAATTTAATCCAATATAATACTTGTCCAAAGCCAGCATCCTATCTTGCTAGCGATGAGTTTGA GTTTATTGATTTTTCAAAGCAAACTACTAATCAAGAAGAAAATACTGCTCTTTTAGCAGCGTTAGATAATTCAGTTAAGC AGCATGATGAAAAAACTGCAAGATGTAATAACAAAATAGTAGAAGTTCAAGCGAAATCTCCTTTTTTAAATTCTAAAATA GTCTGCCAAGAAGCAGTAAAAAATGAAGAAACATTTAATCTCTTAGATCAATTTGAAACTCTCTCTGATAATGAGTTAGT AGAAGAGATTTTAAATATTCCTGAAAATGAATTAGATGAAGTCTTTGAAAAGATTACATATGAAAAATGTGCAGAATTAA TTAATAATATTCCCGATGAGCAAGCACAAAAATTAGTTAGTTATATTTTGCCTTGGCATCTTGAAAAAGTAATAGATTTA ATCACACAAGATAAGTTGGATAAATTATTTAATGAAAACCCTGATAATCTTTCTTTAGAAGAACTTACCGAGCAGGCACT AAATAAATTATCAAATGAGGATATTGCTGATGAATCGTTTAAAAATATAATTATTTTAGCAGGAGAAGAAAAATTTGCAG AAAGGCTTGATATTATTCCAAATGAAAGTTTAGTAAGAATCGTAAGTAATATTCCAGATGATATGCTAGCAACAATAATT TCTCATGCCTCAGATGAAAATATACTAAGAATCGTTAATATTAACTTACCAAGGATATTGTCTTTGCTTCCTGTTGCACA AATTAAACGCATAATAACCTTAATGGACGATGAAGAGGTTGTAGAGCAGCTTGAAAGACAAGGAGAAGCACAGTGTGAAA ATTCTAATGAAACATATCATGAAAATTTTGTAAATAATGGTTCTAGTGTTGTATTGTTAGGTAATAGTGAAAAAAGCAGA TATAATTCTGATGATTCTGGAATTGGAAATGATTCTGACCCTAACGATCATTTGACAGAATACTTCTAA
Upstream 100 bases:
>100_bases TAATTATTAGCCCATATCTTGACTTCCTCATAATTTCTATTATAATCGTGGCGCTGATTATTATCATAAGAAATTGGGAG ATATTATGCCAATAACATCA
Downstream 100 bases:
>100_bases TAAATAGGCCCAATTAAAGAGGATAAGATTCTTTTAAAGCTTATCCTTTTTAGCTATCTTAGCATCAGGTGGGCGTATAT ACAGCGGTTCGATAAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MFNKLRNLIQYNTCPKPASYLASDEFEFIDFSKQTTNQEENTALLAALDNSVKQHDEKTARCNNKIVEVQAKSPFLNSKI VCQEAVKNEETFNLLDQFETLSDNELVEEILNIPENELDEVFEKITYEKCAELINNIPDEQAQKLVSYILPWHLEKVIDL ITQDKLDKLFNENPDNLSLEELTEQALNKLSNEDIADESFKNIIILAGEEKFAERLDIIPNESLVRIVSNIPDDMLATII SHASDENILRIVNINLPRILSLLPVAQIKRIITLMDDEEVVEQLERQGEAQCENSNETYHENFVNNGSSVVLLGNSEKSR YNSDDSGIGNDSDPNDHLTEYF
Sequences:
>Translated_342_residues MFNKLRNLIQYNTCPKPASYLASDEFEFIDFSKQTTNQEENTALLAALDNSVKQHDEKTARCNNKIVEVQAKSPFLNSKI VCQEAVKNEETFNLLDQFETLSDNELVEEILNIPENELDEVFEKITYEKCAELINNIPDEQAQKLVSYILPWHLEKVIDL ITQDKLDKLFNENPDNLSLEELTEQALNKLSNEDIADESFKNIIILAGEEKFAERLDIIPNESLVRIVSNIPDDMLATII SHASDENILRIVNINLPRILSLLPVAQIKRIITLMDDEEVVEQLERQGEAQCENSNETYHENFVNNGSSVVLLGNSEKSR YNSDDSGIGNDSDPNDHLTEYF >Mature_342_residues MFNKLRNLIQYNTCPKPASYLASDEFEFIDFSKQTTNQEENTALLAALDNSVKQHDEKTARCNNKIVEVQAKSPFLNSKI VCQEAVKNEETFNLLDQFETLSDNELVEEILNIPENELDEVFEKITYEKCAELINNIPDEQAQKLVSYILPWHLEKVIDL ITQDKLDKLFNENPDNLSLEELTEQALNKLSNEDIADESFKNIIILAGEEKFAERLDIIPNESLVRIVSNIPDDMLATII SHASDENILRIVNINLPRILSLLPVAQIKRIITLMDDEEVVEQLERQGEAQCENSNETYHENFVNNGSSVVLLGNSEKSR YNSDDSGIGNDSDPNDHLTEYF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39039; Mature: 39039
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKLRNLIQYNTCPKPASYLASDEFEFIDFSKQTTNQEENTALLAALDNSVKQHDEKTA CCHHHHHHHHCCCCCCCHHHHCCCCCHHEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHH RCNNKIVEVQAKSPFLNSKIVCQEAVKNEETFNLLDQFETLSDNELVEEILNIPENELDE HHCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH VFEKITYEKCAELINNIPDEQAQKLVSYILPWHLEKVIDLITQDKLDKLFNENPDNLSLE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ELTEQALNKLSNEDIADESFKNIIILAGEEKFAERLDIIPNESLVRIVSNIPDDMLATII HHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH SHASDENILRIVNINLPRILSLLPVAQIKRIITLMDDEEVVEQLERQGEAQCENSNETYH HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHH ENFVNNGSSVVLLGNSEKSRYNSDDSGIGNDSDPNDHLTEYF HHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MFNKLRNLIQYNTCPKPASYLASDEFEFIDFSKQTTNQEENTALLAALDNSVKQHDEKTA CCHHHHHHHHCCCCCCCHHHHCCCCCHHEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHH RCNNKIVEVQAKSPFLNSKIVCQEAVKNEETFNLLDQFETLSDNELVEEILNIPENELDE HHCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHH VFEKITYEKCAELINNIPDEQAQKLVSYILPWHLEKVIDLITQDKLDKLFNENPDNLSLE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH ELTEQALNKLSNEDIADESFKNIIILAGEEKFAERLDIIPNESLVRIVSNIPDDMLATII HHHHHHHHHHCCCCCCHHHHCCEEEEECCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHH SHASDENILRIVNINLPRILSLLPVAQIKRIITLMDDEEVVEQLERQGEAQCENSNETYH HHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHH ENFVNNGSSVVLLGNSEKSRYNSDDSGIGNDSDPNDHLTEYF HHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA