| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825859
Identifier: 157825859
GI number: 157825859
Start: 714231
End: 715772
Strand: Reverse
Name: 157825859
Synonym: A1C_03990
Alternate gene names: NA
Gene position: 715772-714231 (Counterclockwise)
Preceding gene: 157825860
Following gene: 157825857
Centisome position: 58.14
GC content: 29.31
Gene sequence:
>1542_bases ATGACTCAAAATAAGAAATCAGTATTTAAAGGTTGGAATTTTTTAAAGCCTAAAGGAGGCGGAGCTAATGAAGCAGGAGA GCATGGCGGAGTATATCAAAGCTTAGACGGTAAAGTTACAGCGATGATAAAAAAAGAGGCTTCAAGCTCAAAAAATATAG CCGAGTTTTTAGGATCTCAAATTTTTGAAGCTATAAGTCCCGGAAATGGAGCAAAGGTTAATTTAATTGCTCCTGATTAT TTTAATAAATCTAAAGCCGTTGATTCACAAATATATGTCAAATCTGAATTTTTTGAGAATTATAGTAGTGATATGTATGT GGACATGGATAAACATATGTCTGCTAAAACTAAACCGAGTTCTTGGTTTAGAAAGGATGGCGGTAGACCGCTTTTTATGG GGTCTAGAAATAAATTATTTAGAACCTTAGAAAATGCTTTTAAGGAAATTAAGTATCAGAACTTTGAAAACATTATGCCT GCAAGTTTATTGATCGGCGATTTTGATATACATGTTGGAAATATAGGAGTTATCAGAGATCAAAAAAATCCAAAAACTTT ACCTAAATTAGTAAGAATTGATTTTGCCGGTAGTTTTGATAAGTTGACAAATAATATATATCCGCATTCAAGAGCCAAAC ATTTGCCTGGATTCGGACCTACTAACCATTTTAGAGAATTCCCTTCTACTTTAAGAACAAAAAATCCTAATTTTGCCGAT AGCTTACTTGCAGCTTCTAAAATTGATTTAAGCAAAACCATTGATAAAAGTTTTGATGAATTAACTAAATATTATAGTAA TGAAGCAATTGCAGAATTTGCAAAACAAGCAATGCCAAAGAAATTTAATAATAAAAAATCTACAGAAATAATGTATGAAG AAATTAAGGCTAGTTTAATAGATATAATGAAAAAAAGGCAAGAATCCTTAAAGGAATACGGCTTAGAAATTAAAGTAAAC AGTTTAATTTCTAGAAAATATAGTTTTCCTTATTACGAAGTGAAAGAGCAAGAATTAAAAACATTAATGAAAGAATATCC TGATTATTTTGAGAAAATTCTTAATTATGAAGAAAGAAAAAAAGGAGGGCAAAAACTTAAATTAAGAAATAAAATTACTA CTAGTTTTGCAAGAATTTTAGAAATACTTGGTATTAGAGATAGTGCAAAAAAATTTTTAATAAAGACAATAAAAGGTTTC AATGAAGATATTCAAGATGAAAGAAATTTAGCTGATTCTTTTGATAAAATAAAGATAGAACTAAAACAAAAACCAGTAAA GACACATATAGATGCAGATAGAGAATATGTAGACAATCTAGAAAAATTCAAGAAAGAAGTCGGAACGGATGATATTGTTA GTGTTACTCCAAGTCGATTAGGTCTAGCTAAAAAAGCTAAACAAAAAGCCCAAGATTTATTAAAATTAGATGAAGAAGAT CTAAAACATATAAATACTCTAAAAGAAAATGTTATGAGGCCTGCAAAAATTACTTCGGCTAGTGTTGTTAATAAGAAGTA TACATCGGCTAAAACGCGATAA
Upstream 100 bases:
>100_bases AAGTAGAAAACGGCTTCTATCCTTGATATAAAATAAATAATATGTTTTATTATTATATAAAAATTATCAATTTTATGTAA ATCATTATAAAGAGGTGAGG
Downstream 100 bases:
>100_bases TAAATGAACCAAGCAACAAGAAGCCTGTAACTAAGTAATTAATCAGTAAAAGCCCATATTGCGTAGGTAGCTTAATTCTT TCAGTCTTTTTAGAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MTQNKKSVFKGWNFLKPKGGGANEAGEHGGVYQSLDGKVTAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDY FNKSKAVDSQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGSRNKLFRTLENAFKEIKYQNFENIMP ASLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDKLTNNIYPHSRAKHLPGFGPTNHFREFPSTLRTKNPNFAD SLLAASKIDLSKTIDKSFDELTKYYSNEAIAEFAKQAMPKKFNNKKSTEIMYEEIKASLIDIMKKRQESLKEYGLEIKVN SLISRKYSFPYYEVKEQELKTLMKEYPDYFEKILNYEERKKGGQKLKLRNKITTSFARILEILGIRDSAKKFLIKTIKGF NEDIQDERNLADSFDKIKIELKQKPVKTHIDADREYVDNLEKFKKEVGTDDIVSVTPSRLGLAKKAKQKAQDLLKLDEED LKHINTLKENVMRPAKITSASVVNKKYTSAKTR
Sequences:
>Translated_513_residues MTQNKKSVFKGWNFLKPKGGGANEAGEHGGVYQSLDGKVTAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDY FNKSKAVDSQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGSRNKLFRTLENAFKEIKYQNFENIMP ASLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDKLTNNIYPHSRAKHLPGFGPTNHFREFPSTLRTKNPNFAD SLLAASKIDLSKTIDKSFDELTKYYSNEAIAEFAKQAMPKKFNNKKSTEIMYEEIKASLIDIMKKRQESLKEYGLEIKVN SLISRKYSFPYYEVKEQELKTLMKEYPDYFEKILNYEERKKGGQKLKLRNKITTSFARILEILGIRDSAKKFLIKTIKGF NEDIQDERNLADSFDKIKIELKQKPVKTHIDADREYVDNLEKFKKEVGTDDIVSVTPSRLGLAKKAKQKAQDLLKLDEED LKHINTLKENVMRPAKITSASVVNKKYTSAKTR >Mature_512_residues TQNKKSVFKGWNFLKPKGGGANEAGEHGGVYQSLDGKVTAMIKKEASSSKNIAEFLGSQIFEAISPGNGAKVNLIAPDYF NKSKAVDSQIYVKSEFFENYSSDMYVDMDKHMSAKTKPSSWFRKDGGRPLFMGSRNKLFRTLENAFKEIKYQNFENIMPA SLLIGDFDIHVGNIGVIRDQKNPKTLPKLVRIDFAGSFDKLTNNIYPHSRAKHLPGFGPTNHFREFPSTLRTKNPNFADS LLAASKIDLSKTIDKSFDELTKYYSNEAIAEFAKQAMPKKFNNKKSTEIMYEEIKASLIDIMKKRQESLKEYGLEIKVNS LISRKYSFPYYEVKEQELKTLMKEYPDYFEKILNYEERKKGGQKLKLRNKITTSFARILEILGIRDSAKKFLIKTIKGFN EDIQDERNLADSFDKIKIELKQKPVKTHIDADREYVDNLEKFKKEVGTDDIVSVTPSRLGLAKKAKQKAQDLLKLDEEDL KHINTLKENVMRPAKITSASVVNKKYTSAKTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58665; Mature: 58534
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQNKKSVFKGWNFLKPKGGGANEAGEHGGVYQSLDGKVTAMIKKEASSSKNIAEFLGSQ CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEHHHHHHCCCCCHHHHHHHHH IFEAISPGNGAKVNLIAPDYFNKSKAVDSQIYVKSEFFENYSSDMYVDMDKHMSAKTKPS HHHHHCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCH SWFRKDGGRPLFMGSRNKLFRTLENAFKEIKYQNFENIMPASLLIGDFDIHVGNIGVIRD HHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCEEEECCEEEEEC QKNPKTLPKLVRIDFAGSFDKLTNNIYPHSRAKHLPGFGPTNHFREFPSTLRTKNPNFAD CCCCHHHHHHHEEECCCCHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHH SLLAASKIDLSKTIDKSFDELTKYYSNEAIAEFAKQAMPKKFNNKKSTEIMYEEIKASLI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH DIMKKRQESLKEYGLEIKVNSLISRKYSFPYYEVKEQELKTLMKEYPDYFEKILNYEERK HHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH KGGQKLKLRNKITTSFARILEILGIRDSAKKFLIKTIKGFNEDIQDERNLADSFDKIKIE CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE LKQKPVKTHIDADREYVDNLEKFKKEVGTDDIVSVTPSRLGLAKKAKQKAQDLLKLDEED ECCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHH LKHINTLKENVMRPAKITSASVVNKKYTSAKTR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQNKKSVFKGWNFLKPKGGGANEAGEHGGVYQSLDGKVTAMIKKEASSSKNIAEFLGSQ CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEHHHHHHCCCCCHHHHHHHHH IFEAISPGNGAKVNLIAPDYFNKSKAVDSQIYVKSEFFENYSSDMYVDMDKHMSAKTKPS HHHHHCCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCH SWFRKDGGRPLFMGSRNKLFRTLENAFKEIKYQNFENIMPASLLIGDFDIHVGNIGVIRD HHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCEEEECCEEEEEC QKNPKTLPKLVRIDFAGSFDKLTNNIYPHSRAKHLPGFGPTNHFREFPSTLRTKNPNFAD CCCCHHHHHHHEEECCCCHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCCCHHH SLLAASKIDLSKTIDKSFDELTKYYSNEAIAEFAKQAMPKKFNNKKSTEIMYEEIKASLI HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHH DIMKKRQESLKEYGLEIKVNSLISRKYSFPYYEVKEQELKTLMKEYPDYFEKILNYEERK HHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH KGGQKLKLRNKITTSFARILEILGIRDSAKKFLIKTIKGFNEDIQDERNLADSFDKIKIE CCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE LKQKPVKTHIDADREYVDNLEKFKKEVGTDDIVSVTPSRLGLAKKAKQKAQDLLKLDEED ECCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCHHH LKHINTLKENVMRPAKITSASVVNKKYTSAKTR HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]