| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825840
Identifier: 157825840
GI number: 157825840
Start: 698175
End: 698615
Strand: Reverse
Name: 157825840
Synonym: A1C_03895
Alternate gene names: NA
Gene position: 698615-698175 (Counterclockwise)
Preceding gene: 157825841
Following gene: 157825837
Centisome position: 56.75
GC content: 36.05
Gene sequence:
>441_bases ATGGTAAGTACAGCACCGTTAAAATTAATTGCAGTTATCGATAGTAAGCAAATGATGCTTTACGACGCGTTTGGTATTAA AGTTACTACTAATAAACCTTTAAAATTATCTTTGGATTTAGATGAGCATCACCACCATAGAGAAAGAAGACAAAGCCTTT ACCAAAATAAATCTACACCGGCTTCGTTATTTGAGCCGCATACTTCGCTAAAAGATATAGAACATAAAGAGGCAGCAAGG AGCGTTGTTAAACATCTAGAGAAAGTAATGGCTGCTGATCACGCTAAATATAAGGAATTGATTATTGTAGCAGAATCGCA GATGCTTGGATGTGTTAGACAAGAACTGAAAAACGGTCTAAAAAAAATGGTTACTAAAGAAATCGCTAAGGATTTAGTAC AACATAGTGCAGATGCAGTCGAGCGAGCAGTATTTTCTTAG
Upstream 100 bases:
>100_bases AATCATTAATAGCGAAAAGCAAAAATTATTAAATTAATATTGGTTTATATAATAATTAGTATTATCATAAAATGACCAAT ATATTATTATGGAGGTATTT
Downstream 100 bases:
>100_bases GTCATAATAAATAGCAAATTACAAAAGTAATTTGCTATTTGTAATTTGCTATGAACTTTATAATAAATCTGCATATGTTC CTGTTCGATATAAAATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS
Sequences:
>Translated_146_residues MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS >Mature_146_residues MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS
Specific function: Unknown
COG id: COG5622
COG function: function code N; Protein required for attachment to host cells
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019291 [H]
Pfam domain/function: PF10116 Host_attach [H]
EC number: NA
Molecular weight: Translated: 16553; Mature: 16553
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTP CCCCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCC ASLFEPHTSLKDIEHKEAARSVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH KKMVTKEIAKDLVQHSADAVERAVFS HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTP CCCCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCC ASLFEPHTSLKDIEHKEAARSVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGL HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH KKMVTKEIAKDLVQHSADAVERAVFS HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]