Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is 157825840

Identifier: 157825840

GI number: 157825840

Start: 698175

End: 698615

Strand: Reverse

Name: 157825840

Synonym: A1C_03895

Alternate gene names: NA

Gene position: 698615-698175 (Counterclockwise)

Preceding gene: 157825841

Following gene: 157825837

Centisome position: 56.75

GC content: 36.05

Gene sequence:

>441_bases
ATGGTAAGTACAGCACCGTTAAAATTAATTGCAGTTATCGATAGTAAGCAAATGATGCTTTACGACGCGTTTGGTATTAA
AGTTACTACTAATAAACCTTTAAAATTATCTTTGGATTTAGATGAGCATCACCACCATAGAGAAAGAAGACAAAGCCTTT
ACCAAAATAAATCTACACCGGCTTCGTTATTTGAGCCGCATACTTCGCTAAAAGATATAGAACATAAAGAGGCAGCAAGG
AGCGTTGTTAAACATCTAGAGAAAGTAATGGCTGCTGATCACGCTAAATATAAGGAATTGATTATTGTAGCAGAATCGCA
GATGCTTGGATGTGTTAGACAAGAACTGAAAAACGGTCTAAAAAAAATGGTTACTAAAGAAATCGCTAAGGATTTAGTAC
AACATAGTGCAGATGCAGTCGAGCGAGCAGTATTTTCTTAG

Upstream 100 bases:

>100_bases
AATCATTAATAGCGAAAAGCAAAAATTATTAAATTAATATTGGTTTATATAATAATTAGTATTATCATAAAATGACCAAT
ATATTATTATGGAGGTATTT

Downstream 100 bases:

>100_bases
GTCATAATAAATAGCAAATTACAAAAGTAATTTGCTATTTGTAATTTGCTATGAACTTTATAATAAATCTGCATATGTTC
CTGTTCGATATAAAATAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR
SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS

Sequences:

>Translated_146_residues
MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR
SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS
>Mature_146_residues
MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTPASLFEPHTSLKDIEHKEAAR
SVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGLKKMVTKEIAKDLVQHSADAVERAVFS

Specific function: Unknown

COG id: COG5622

COG function: function code N; Protein required for attachment to host cells

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019291 [H]

Pfam domain/function: PF10116 Host_attach [H]

EC number: NA

Molecular weight: Translated: 16553; Mature: 16553

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTP
CCCCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
ASLFEPHTSLKDIEHKEAARSVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
KKMVTKEIAKDLVQHSADAVERAVFS
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSTAPLKLIAVIDSKQMMLYDAFGIKVTTNKPLKLSLDLDEHHHHRERRQSLYQNKSTP
CCCCCCCCEEEEECCCCEEEEEECCEEEECCCCEEEEECCHHHHHHHHHHHHHHHCCCCC
ASLFEPHTSLKDIEHKEAARSVVKHLEKVMAADHAKYKELIIVAESQMLGCVRQELKNGL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
KKMVTKEIAKDLVQHSADAVERAVFS
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]