| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825837
Identifier: 157825837
GI number: 157825837
Start: 696697
End: 697416
Strand: Reverse
Name: 157825837
Synonym: A1C_03880
Alternate gene names: NA
Gene position: 697416-696697 (Counterclockwise)
Preceding gene: 157825840
Following gene: 157825832
Centisome position: 56.65
GC content: 35.0
Gene sequence:
>720_bases ATGCCGCAAATTTATTTTAACGGTCCAGAAGGACGAATTGAAGGAAGATATGCAAAAGCTACCGCATCTCATGCCCCTAT TGCATTAATTCTTCATCCTCATCCTTTATATGAGGGTAATATGAATAATAAAGTAGTTTATAATGCCTATAAAATTTTAG CAGATAACGGTTATACCGTCTTACGTATTAATTTTAGAGGAGTGGGGGGATCGCAAGGTAAATTTGATAATGGAGTCGGT GAAGTTGTTGATGCTGGGGCAGCTCTCGACTGGTTACAGCAGAATAACCCAAATGCTCAGTCCAACCTGATATTAGGCTT TTCTTTTGGAGCGTGGATAGCTATGCAGCTTGTAATGAGACGTCCGGAAATAAATCATTTTATTGCTATTTCGCCGCCGG TTAATACAATTCATAAATATGATTTCTCATTCCTTTCACCTTGTCCTATTCCAGGGTTTATATTACAGGGAGATAATGAT AGTATAGTATCGGCAGATGATGTAAAAGACCTAGCAAATAGATTATCTAAGCAACAATCCCATATTAAAGTTGATTATAA AATTATCAATGGGGCGGACCATTTCTTTCGTTATAAAACTGAGGAATTTTCTAAAGCAATAAATGATTACTTAATAACGA TCCAATCTAATTATCATCACCATAATAACAATGTACATGAAGCAATTAGTAAGAGCAAAAAGAAACTATTTTTATATTAG
Upstream 100 bases:
>100_bases CGATTATTTAGTGATAGTGTTTTAAAATATAAGAATAGTTGCACTAATAAGAAAAAGTGGTAAAATATCATATCGCACAA ATTAAATATTATGAATAATT
Downstream 100 bases:
>100_bases GTTCTTCTCCGTTATTACAAGTAGGAGTTGCACCGTGTGGATCAATTTCACCTGTGTCATCCCGTGGCTTGGCAACACGG TGGACACCCAGCAGGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MPQIYFNGPEGRIEGRYAKATASHAPIALILHPHPLYEGNMNNKVVYNAYKILADNGYTVLRINFRGVGGSQGKFDNGVG EVVDAGAALDWLQQNNPNAQSNLILGFSFGAWIAMQLVMRRPEINHFIAISPPVNTIHKYDFSFLSPCPIPGFILQGDND SIVSADDVKDLANRLSKQQSHIKVDYKIINGADHFFRYKTEEFSKAINDYLITIQSNYHHHNNNVHEAISKSKKKLFLY
Sequences:
>Translated_239_residues MPQIYFNGPEGRIEGRYAKATASHAPIALILHPHPLYEGNMNNKVVYNAYKILADNGYTVLRINFRGVGGSQGKFDNGVG EVVDAGAALDWLQQNNPNAQSNLILGFSFGAWIAMQLVMRRPEINHFIAISPPVNTIHKYDFSFLSPCPIPGFILQGDND SIVSADDVKDLANRLSKQQSHIKVDYKIINGADHFFRYKTEEFSKAINDYLITIQSNYHHHNNNVHEAISKSKKKLFLY >Mature_238_residues PQIYFNGPEGRIEGRYAKATASHAPIALILHPHPLYEGNMNNKVVYNAYKILADNGYTVLRINFRGVGGSQGKFDNGVGE VVDAGAALDWLQQNNPNAQSNLILGFSFGAWIAMQLVMRRPEINHFIAISPPVNTIHKYDFSFLSPCPIPGFILQGDNDS IVSADDVKDLANRLSKQQSHIKVDYKIINGADHFFRYKTEEFSKAINDYLITIQSNYHHHNNNVHEAISKSKKKLFLY
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 26891; Mature: 26760
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQIYFNGPEGRIEGRYAKATASHAPIALILHPHPLYEGNMNNKVVYNAYKILADNGYTV CCCEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEE LRINFRGVGGSQGKFDNGVGEVVDAGAALDWLQQNNPNAQSNLILGFSFGAWIAMQLVMR EEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHCEEEEECHHHHHHHHHHHC RPEINHFIAISPPVNTIHKYDFSFLSPCPIPGFILQGDNDSIVSADDVKDLANRLSKQQS CCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCCC HIKVDYKIINGADHFFRYKTEEFSKAINDYLITIQSNYHHHNNNVHEAISKSKKKLFLY CEEEEEEEECCCHHHHEECHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCEEECC >Mature Secondary Structure PQIYFNGPEGRIEGRYAKATASHAPIALILHPHPLYEGNMNNKVVYNAYKILADNGYTV CCEEEECCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEE LRINFRGVGGSQGKFDNGVGEVVDAGAALDWLQQNNPNAQSNLILGFSFGAWIAMQLVMR EEEEEEECCCCCCCCCCCHHHHHHCCHHHHHHHCCCCCCHHCEEEEECHHHHHHHHHHHC RPEINHFIAISPPVNTIHKYDFSFLSPCPIPGFILQGDNDSIVSADDVKDLANRLSKQQS CCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCEEEECCCCCEECHHHHHHHHHHHHCCCC HIKVDYKIINGADHFFRYKTEEFSKAINDYLITIQSNYHHHNNNVHEAISKSKKKLFLY CEEEEEEEECCCHHHHEECHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]