Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

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The map label for this gene is pssA [H]

Identifier: 157825453

GI number: 157825453

Start: 331415

End: 332182

Strand: Direct

Name: pssA [H]

Synonym: A1C_01770

Alternate gene names: 157825453

Gene position: 331415-332182 (Clockwise)

Preceding gene: 157825452

Following gene: 157825454

Centisome position: 26.92

GC content: 31.77

Gene sequence:

>768_bases
TTGTTAAAAATTCGTAAATCTATAATAACTAAACCTGTACCTCTAATAAAATTAATTCCCAACTTTATTACGTTGCTTGG
TTTAGTAACCGGTATGAGTTCTTTAAAATTTGCTTTGGATAGCAGATGGGAACTTGCTGTATATTGCATTATAGTAGCGG
CAATTGTTGATGGTGTCGACGGTAGAATAGCAAGGATGCTAAATGCAGCTAGCCCATTTGGTGCAGAGCTTGATTCATTG
TGCGATTTTGCTAATTTTGGTATAGCTCCTGCTTATTTAATATATTTATGGTCTTTTCAGCAATATGAATATAAGGTATT
TTCATCAGCGGTAATGCTATTATTTATAGTGTGTATGGCATTACGTTTAGCTCGCTTTAACGTTGGTATTTATCAACCGA
AACAAGATAGAACAACTGAATATTTTTTTACCGGTGTACCTGCCCCATGTGGTGCTTTACTTGCTTTAACTCCTGTAATG
ATAGATTTTGAAATAGGTACGTTATTAAATATTAATACCCGTACTCACACTATAACAATTAATATATATTTGGCTATTAT
AGCTTTTCTAATTGCTAGTAGGCTTCCTACAATCTCAACAAAAAATTTGAGTATTAAACCTGAATATTTATCGCTTGCAA
TGATTTTAATTGCTATTGCTATTATAAATCTTATCATATATCCATGGTATTCACTGCCGTTAATTGCAGTTATATATATT
CTTTCTATACCAATTTGTTATTTTTTTAAACATAGAGGGTATTGGTGA

Upstream 100 bases:

>100_bases
CCGGCGACTTAATCGTTGGATCCAGTAAAATACTAGTATTTTTTATTGTTTGGATGGATACCGTGATCAAGCAATGGTAT
GACACTTGGGAGTATAAAAA

Downstream 100 bases:

>100_bases
AGTTAATTATGCCGAGTATATTACAACAAGCCATCGACAAATATACACGTCATCCATTTACTAAATATGTAACTATTATA
GCCTTAATAATATTTATTTA

Product: CDP-diacylglycerol--serine O-phosphatidyltransferase

Products: NA

Alternate protein names: Phosphatidylserine synthase [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL
CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM
IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI
LSIPICYFFKHRGYW

Sequences:

>Translated_255_residues
MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL
CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM
IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI
LSIPICYFFKHRGYW
>Mature_255_residues
MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL
CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM
IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI
LSIPICYFFKHRGYW

Specific function: Unknown

COG id: COG1183

COG function: function code I; Phosphatidylserine synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320864, Length=138, Percent_Identity=35.5072463768116, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004533
- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.8 [H]

Molecular weight: Translated: 28665; Mature: 28665

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GRIARMLNAASPFGAELDSLCDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMA
HHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVMIDFEIGTLLNINTRTHTITI
HHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEE
NIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LSIPICYFFKHRGYW
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVD
CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GRIARMLNAASPFGAELDSLCDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMA
HHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVMIDFEIGTLLNINTRTHTITI
HHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEE
NIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI
HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
LSIPICYFFKHRGYW
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]