| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is pssA [H]
Identifier: 157825453
GI number: 157825453
Start: 331415
End: 332182
Strand: Direct
Name: pssA [H]
Synonym: A1C_01770
Alternate gene names: 157825453
Gene position: 331415-332182 (Clockwise)
Preceding gene: 157825452
Following gene: 157825454
Centisome position: 26.92
GC content: 31.77
Gene sequence:
>768_bases TTGTTAAAAATTCGTAAATCTATAATAACTAAACCTGTACCTCTAATAAAATTAATTCCCAACTTTATTACGTTGCTTGG TTTAGTAACCGGTATGAGTTCTTTAAAATTTGCTTTGGATAGCAGATGGGAACTTGCTGTATATTGCATTATAGTAGCGG CAATTGTTGATGGTGTCGACGGTAGAATAGCAAGGATGCTAAATGCAGCTAGCCCATTTGGTGCAGAGCTTGATTCATTG TGCGATTTTGCTAATTTTGGTATAGCTCCTGCTTATTTAATATATTTATGGTCTTTTCAGCAATATGAATATAAGGTATT TTCATCAGCGGTAATGCTATTATTTATAGTGTGTATGGCATTACGTTTAGCTCGCTTTAACGTTGGTATTTATCAACCGA AACAAGATAGAACAACTGAATATTTTTTTACCGGTGTACCTGCCCCATGTGGTGCTTTACTTGCTTTAACTCCTGTAATG ATAGATTTTGAAATAGGTACGTTATTAAATATTAATACCCGTACTCACACTATAACAATTAATATATATTTGGCTATTAT AGCTTTTCTAATTGCTAGTAGGCTTCCTACAATCTCAACAAAAAATTTGAGTATTAAACCTGAATATTTATCGCTTGCAA TGATTTTAATTGCTATTGCTATTATAAATCTTATCATATATCCATGGTATTCACTGCCGTTAATTGCAGTTATATATATT CTTTCTATACCAATTTGTTATTTTTTTAAACATAGAGGGTATTGGTGA
Upstream 100 bases:
>100_bases CCGGCGACTTAATCGTTGGATCCAGTAAAATACTAGTATTTTTTATTGTTTGGATGGATACCGTGATCAAGCAATGGTAT GACACTTGGGAGTATAAAAA
Downstream 100 bases:
>100_bases AGTTAATTATGCCGAGTATATTACAACAAGCCATCGACAAATATACACGTCATCCATTTACTAAATATGTAACTATTATA GCCTTAATAATATTTATTTA
Product: CDP-diacylglycerol--serine O-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI LSIPICYFFKHRGYW
Sequences:
>Translated_255_residues MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI LSIPICYFFKHRGYW >Mature_255_residues MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVDGRIARMLNAASPFGAELDSL CDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMALRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVM IDFEIGTLLNINTRTHTITINIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI LSIPICYFFKHRGYW
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=138, Percent_Identity=35.5072463768116, Blast_Score=81, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 28665; Mature: 28665
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVD CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC GRIARMLNAASPFGAELDSLCDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMA HHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVMIDFEIGTLLNINTRTHTITI HHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEE NIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LSIPICYFFKHRGYW HHHHHHHHHHHCCCC >Mature Secondary Structure MLKIRKSIITKPVPLIKLIPNFITLLGLVTGMSSLKFALDSRWELAVYCIIVAAIVDGVD CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC GRIARMLNAASPFGAELDSLCDFANFGIAPAYLIYLWSFQQYEYKVFSSAVMLLFIVCMA HHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRLARFNVGIYQPKQDRTTEYFFTGVPAPCGALLALTPVMIDFEIGTLLNINTRTHTITI HHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHEEEECCCEEEECCCEEEEEE NIYLAIIAFLIASRLPTISTKNLSIKPEYLSLAMILIAIAIINLIIYPWYSLPLIAVIYI HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LSIPICYFFKHRGYW HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]