| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825378
Identifier: 157825378
GI number: 157825378
Start: 257689
End: 258228
Strand: Direct
Name: 157825378
Synonym: A1C_01360
Alternate gene names: NA
Gene position: 257689-258228 (Clockwise)
Preceding gene: 157825377
Following gene: 157825380
Centisome position: 20.93
GC content: 28.52
Gene sequence:
>540_bases ATGCCCAAGCCTGATTTTTCTGACCCTGACAAACAAATTCACGAAATAATTAGAGTTAATCATGCTGGAGAGTATGGGGC AAAGAGAATTTGTCAAGGACAACTAAAATATATCACATCTCAAAATGATCATACATTAATTAAAGAAATGCTTGATCACG AAGAGGTACATCTAAATTATTTTGAAAAAAAATTACTAGAAAAAGAAGTAAGACCCACGTTTTTATTATTTTTTTGGCAT CATTGCGGATTTTTACTGGGTGCTTTATCTTCCTTGATTGGAATAAAAACGGCGATGCTTGTTACCGAGAGTGTCGAAGA AGTAATAGAAAAACATTATGAACAGCAAATAAATTATTTAGAAAATAAAAATGTTGAGCAGGAATTATTAAATAATATTA TTAAATTTCGACTTGATGAAATTAAACATAAAAATATTGCTATAATGAATGATAGTACTGAGGCAATATTTGCAGAAATA ACTAGTAAAATAGTGAAGATAATTTGTCATATCTCTATAATTTTAAGTCAGAAAATTTAG
Upstream 100 bases:
>100_bases TCCTGCTTTTGAGGGAGTGACATAAACGAGCCATGCAACAACGCATATATAATGCAGAGATGCATAAATTATTTAAAAGG AAAATATAAGTAGCAAATGT
Downstream 100 bases:
>100_bases AGTTAACAGCCTGATTAGTTGAAAAATCTAGAAATATTTTACTTCTAAGATCTTAAGAAGAGCATACAAAAACATTAATA ATATTATTAGAAATGCTGAT
Product: ubiquinone biosynthesis protein Coq7
Products: NA
Alternate protein names: Coq7 Family Protein; Ubiquinone Biosynthesis Family Protein; Ubiquinone Biosynthesis Protein; 2-Polyprenyl-3-Methyl-6-Methoxy-1 4-Benzoquinol Hydroxylase; Ubiquinone Biosynthesis Monooxygenase
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MPKPDFSDPDKQIHEIIRVNHAGEYGAKRICQGQLKYITSQNDHTLIKEMLDHEEVHLNYFEKKLLEKEVRPTFLLFFWH HCGFLLGALSSLIGIKTAMLVTESVEEVIEKHYEQQINYLENKNVEQELLNNIIKFRLDEIKHKNIAIMNDSTEAIFAEI TSKIVKIICHISIILSQKI
Sequences:
>Translated_179_residues MPKPDFSDPDKQIHEIIRVNHAGEYGAKRICQGQLKYITSQNDHTLIKEMLDHEEVHLNYFEKKLLEKEVRPTFLLFFWH HCGFLLGALSSLIGIKTAMLVTESVEEVIEKHYEQQINYLENKNVEQELLNNIIKFRLDEIKHKNIAIMNDSTEAIFAEI TSKIVKIICHISIILSQKI >Mature_178_residues PKPDFSDPDKQIHEIIRVNHAGEYGAKRICQGQLKYITSQNDHTLIKEMLDHEEVHLNYFEKKLLEKEVRPTFLLFFWHH CGFLLGALSSLIGIKTAMLVTESVEEVIEKHYEQQINYLENKNVEQELLNNIIKFRLDEIKHKNIAIMNDSTEAIFAEIT SKIVKIICHISIILSQKI
Specific function: Unknown
COG id: COG2941
COG function: function code H; Ubiquinone biosynthesis protein COQ7
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI25453484, Length=169, Percent_Identity=38.4615384615385, Blast_Score=120, Evalue=6e-28, Organism=Homo sapiens, GI300244542, Length=169, Percent_Identity=38.4615384615385, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17552756, Length=169, Percent_Identity=32.5443786982249, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324699, Length=180, Percent_Identity=33.8888888888889, Blast_Score=99, Evalue=4e-22, Organism=Drosophila melanogaster, GI24640215, Length=177, Percent_Identity=37.2881355932203, Blast_Score=121, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.14.13.-
Molecular weight: Translated: 20898; Mature: 20766
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPDFSDPDKQIHEIIRVNHAGEYGAKRICQGQLKYITSQNDHTLIKEMLDHEEVHLNY CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHH FEKKLLEKEVRPTFLLFFWHHCGFLLGALSSLIGIKTAMLVTESVEEVIEKHYEQQINYL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKNVEQELLNNIIKFRLDEIKHKNIAIMNDSTEAIFAEITSKIVKIICHISIILSQKI HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PKPDFSDPDKQIHEIIRVNHAGEYGAKRICQGQLKYITSQNDHTLIKEMLDHEEVHLNY CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHH FEKKLLEKEVRPTFLLFFWHHCGFLLGALSSLIGIKTAMLVTESVEEVIEKHYEQQINYL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENKNVEQELLNNIIKFRLDEIKHKNIAIMNDSTEAIFAEITSKIVKIICHISIILSQKI HCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA