| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825349
Identifier: 157825349
GI number: 157825349
Start: 222823
End: 223554
Strand: Direct
Name: 157825349
Synonym: A1C_01155
Alternate gene names: NA
Gene position: 222823-223554 (Clockwise)
Preceding gene: 157825348
Following gene: 157825352
Centisome position: 18.1
GC content: 32.51
Gene sequence:
>732_bases ATGGATAGTAATGAACAAATAAAGCTTTTTACTAAAGCTCATGAAGCAACTAAATCTGAAGAGTATTTAGCTACTTCGTC GTTAGGAAGTTTTGTATACGGTACTGCTGTAGATAAAAACGGTGTAGATCAATTGACTGGTAAATATATTGAAGGAACAA ACGGTAAGATAATATCTAATGCAATAACTCGTGTACCAACCTTAAGTTTAACGGAAGACGGCGTTGGTTACAAGCATAAT GGTGGTTATGAAATAGTAGAATCAACAGATCGTGCGTTATATCAGGAAATACCTGGCGTGAAAGGACAATATACAAATAA ATTAGTTATGGATACCAGTATTCTTTCTTTACATGGTTGTATTATTCAGCAGTTAATACAAAATTGCTATTCAAGCGACG ATATTGAAAAAGCTTTAAGTTTAGGAACTATTGAAAAGAGAGAAAGTTATAAAAATAAGAAATTAGCAGAATACAAGCCA AATTTGACAAGTACGCTATGGCATGGTACAGAGCAAGCTATGAAAAATAAAGAAGTAGAACTTTCACAAGAAATACAGAA ATATGCCGCAATAAATGAAGCTTATAAAGCATTATTTAATTATCATACTTCCGGTACTAGCGAAGAACAAGAAGAGCAGT TTTATAGCCTTGATTATAATAATCTTAATGATGATCAAACTCAAATCTTAGGAGATGAGGGAGATGAAGGATATATATCT GATATTGCCTAG
Upstream 100 bases:
>100_bases TGGCAGGAATAGGTAGTTTTTTTCATCTAGTAGTTGGCTAAGCAAAATACCTTTAATAACAGGGGCTTTTTTTGGTACTA GTTATTGGGCAAAAGGCATT
Downstream 100 bases:
>100_bases TCACTAGATACAAAATTTTCTAGAGAGTAATGTTATAGATCTATAACATTACTCTGTTTTATTTAATAACCTCTTTAGCT CTCTTTTCAAAAGCTATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MDSNEQIKLFTKAHEATKSEEYLATSSLGSFVYGTAVDKNGVDQLTGKYIEGTNGKIISNAITRVPTLSLTEDGVGYKHN GGYEIVESTDRALYQEIPGVKGQYTNKLVMDTSILSLHGCIIQQLIQNCYSSDDIEKALSLGTIEKRESYKNKKLAEYKP NLTSTLWHGTEQAMKNKEVELSQEIQKYAAINEAYKALFNYHTSGTSEEQEEQFYSLDYNNLNDDQTQILGDEGDEGYIS DIA
Sequences:
>Translated_243_residues MDSNEQIKLFTKAHEATKSEEYLATSSLGSFVYGTAVDKNGVDQLTGKYIEGTNGKIISNAITRVPTLSLTEDGVGYKHN GGYEIVESTDRALYQEIPGVKGQYTNKLVMDTSILSLHGCIIQQLIQNCYSSDDIEKALSLGTIEKRESYKNKKLAEYKP NLTSTLWHGTEQAMKNKEVELSQEIQKYAAINEAYKALFNYHTSGTSEEQEEQFYSLDYNNLNDDQTQILGDEGDEGYIS DIA >Mature_243_residues MDSNEQIKLFTKAHEATKSEEYLATSSLGSFVYGTAVDKNGVDQLTGKYIEGTNGKIISNAITRVPTLSLTEDGVGYKHN GGYEIVESTDRALYQEIPGVKGQYTNKLVMDTSILSLHGCIIQQLIQNCYSSDDIEKALSLGTIEKRESYKNKKLAEYKP NLTSTLWHGTEQAMKNKEVELSQEIQKYAAINEAYKALFNYHTSGTSEEQEEQFYSLDYNNLNDDQTQILGDEGDEGYIS DIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27147; Mature: 27147
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNEQIKLFTKAHEATKSEEYLATSSLGSFVYGTAVDKNGVDQLTGKYIEGTNGKIISN CCCCCEEEEEEHHHHHCCHHHHHHHHHHCCHHEECCCCCCCHHHHCCCCEECCCCCCHHH AITRVPTLSLTEDGVGYKHNGGYEIVESTDRALYQEIPGVKGQYTNKLVMDTSILSLHGC HHHHCCCCEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHH IIQQLIQNCYSSDDIEKALSLGTIEKRESYKNKKLAEYKPNLTSTLWHGTEQAMKNKEVE HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCHHHCCCCHHHHHHCCHHHHHHCCCCH LSQEIQKYAAINEAYKALFNYHTSGTSEEQEEQFYSLDYNNLNDDQTQILGDEGDEGYIS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC DIA CCC >Mature Secondary Structure MDSNEQIKLFTKAHEATKSEEYLATSSLGSFVYGTAVDKNGVDQLTGKYIEGTNGKIISN CCCCCEEEEEEHHHHHCCHHHHHHHHHHCCHHEECCCCCCCHHHHCCCCEECCCCCCHHH AITRVPTLSLTEDGVGYKHNGGYEIVESTDRALYQEIPGVKGQYTNKLVMDTSILSLHGC HHHHCCCCEECCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHH IIQQLIQNCYSSDDIEKALSLGTIEKRESYKNKKLAEYKPNLTSTLWHGTEQAMKNKEVE HHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCHHHCCCCHHHHHHCCHHHHHHCCCCH LSQEIQKYAAINEAYKALFNYHTSGTSEEQEEQFYSLDYNNLNDDQTQILGDEGDEGYIS HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCC DIA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA