Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825341

Identifier: 157825341

GI number: 157825341

Start: 215437

End: 215658

Strand: Direct

Name: 157825341

Synonym: A1C_01115

Alternate gene names: NA

Gene position: 215437-215658 (Clockwise)

Preceding gene: 157825340

Following gene: 157825345

Centisome position: 17.5

GC content: 33.33

Gene sequence:

>222_bases
TTGCAAGAATTTGCTTATTTGAGAAAGCAGTATTGGGGCAATCATTTTTGGGCTAGAGGTTATATGGCAGTTAATTTGGG
TAATATTACTGATGAAATGATACAGCAGTATATTGATGAGCAAGAAGGTGAAACTATTAATGATGACCTATTTCTAATCG
ATTACACTTCTATTTATAACATCTCAGCTTATAGCCGAGAGTTGTTTAGTTATTCAGGATGA

Upstream 100 bases:

>100_bases
AGTAGCTTGTGATCATGTTCATATGTTTATCTAGTATAGACCGCAAATAACACCTAGCAAACTTGTGCAGTATTGAAAAT
GCAGTAGCTCAAGAATATTA

Downstream 100 bases:

>100_bases
TTTTAATTTTTAATAATACAATCCATTGCTGCATCATAATTTTCATAATGCCCTACACTTATTATATAATAGAAAGATTT
TTCCCATTTTGGAAGATTAA

Product: transposase IS200-family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 73; Mature: 73

Protein sequence:

>73_residues
MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG

Sequences:

>Translated_73_residues
MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG
>Mature_73_residues
MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8739; Mature: 8739

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN
CCHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEC
ISAYSRELFSYSG
CHHHHHHHHCCCC
>Mature Secondary Structure
MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN
CCHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEC
ISAYSRELFSYSG
CHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA