| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825341
Identifier: 157825341
GI number: 157825341
Start: 215437
End: 215658
Strand: Direct
Name: 157825341
Synonym: A1C_01115
Alternate gene names: NA
Gene position: 215437-215658 (Clockwise)
Preceding gene: 157825340
Following gene: 157825345
Centisome position: 17.5
GC content: 33.33
Gene sequence:
>222_bases TTGCAAGAATTTGCTTATTTGAGAAAGCAGTATTGGGGCAATCATTTTTGGGCTAGAGGTTATATGGCAGTTAATTTGGG TAATATTACTGATGAAATGATACAGCAGTATATTGATGAGCAAGAAGGTGAAACTATTAATGATGACCTATTTCTAATCG ATTACACTTCTATTTATAACATCTCAGCTTATAGCCGAGAGTTGTTTAGTTATTCAGGATGA
Upstream 100 bases:
>100_bases AGTAGCTTGTGATCATGTTCATATGTTTATCTAGTATAGACCGCAAATAACACCTAGCAAACTTGTGCAGTATTGAAAAT GCAGTAGCTCAAGAATATTA
Downstream 100 bases:
>100_bases TTTTAATTTTTAATAATACAATCCATTGCTGCATCATAATTTTCATAATGCCCTACACTTATTATATAATAGAAAGATTT TTCCCATTTTGGAAGATTAA
Product: transposase IS200-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG
Sequences:
>Translated_73_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG >Mature_73_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYSRELFSYSG
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8739; Mature: 8739
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEC ISAYSRELFSYSG CHHHHHHHHCCCC >Mature Secondary Structure MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCCEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEC ISAYSRELFSYSG CHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA