| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825281
Identifier: 157825281
GI number: 157825281
Start: 154665
End: 154781
Strand: Direct
Name: 157825281
Synonym: A1C_00815
Alternate gene names: NA
Gene position: 154665-154781 (Clockwise)
Preceding gene: 157825280
Following gene: 157825282
Centisome position: 12.56
GC content: 35.04
Gene sequence:
>117_bases ATGACTCAGGAATTTCGTTTCTCAGTTAAAGAAGTTAGTGTTATTCCTTTAGGAAAAGGAATAGTATTACAGCCTCTGCC TAACAGTTGGAAAGATGTTTTTCAGGAAATGGCTTAA
Upstream 100 bases:
>100_bases GAATAGTTGTTTGCTTTAGTAATAAAGTTAATCAATACTTTTGAGGTATAGTTATGAATAAAGCAAAAATATTTATGAAT GGTCACAGTCAAGCAGTAAG
Downstream 100 bases:
>100_bases ATTTCTAGTGATGATGTTTTTGCTGATGGAAGAAAAGATTTACCACAACAAAAAAGGAAATATTTTGAATGATCTACATG CTTGACACTAATATTTGTGT
Product: antitoxin of toxin-antitoxin system VapB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 38; Mature: 37
Protein sequence:
>38_residues MTQEFRFSVKEVSVIPLGKGIVLQPLPNSWKDVFQEMA
Sequences:
>Translated_38_residues MTQEFRFSVKEVSVIPLGKGIVLQPLPNSWKDVFQEMA >Mature_37_residues TQEFRFSVKEVSVIPLGKGIVLQPLPNSWKDVFQEMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4350; Mature: 4219
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQEFRFSVKEVSVIPLGKGIVLQPLPNSWKDVFQEMA CCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHCC >Mature Secondary Structure TQEFRFSVKEVSVIPLGKGIVLQPLPNSWKDVFQEMA CCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA