| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is aatA [H]
Identifier: 157825251
GI number: 157825251
Start: 120021
End: 121220
Strand: Reverse
Name: aatA [H]
Synonym: A1C_00650
Alternate gene names: 157825251
Gene position: 121220-120021 (Counterclockwise)
Preceding gene: 157825255
Following gene: 157825250
Centisome position: 9.85
GC content: 33.42
Gene sequence:
>1200_bases ATGTCAATTATTTCTACAAGGCTAAATTCTATAAAGCCGTCACCAACCCTTGCAGTTGTAAAGAAAACCCTTGAACTTAA AAAATCGGGAATTGATATTATTGCACTTGGTGCAGGTGAGCCTGATTTTGATACACCTGACAATATTAAGGAAGCGGCGA TTAAAGCGATTCAAGACGGCTTTACTAAATATACTAACGTTGAGGGTATGCCTCTTTTAAAGCAAGCAATAAAAGACAAA TTCAAACGTGAAAATAGTATAGATTACGAACTTGATGAAATAATAGTAAGTACCGGCGGTAAACAAGTTATATATAATTT ATTTATGGCATCCTTAGATAAAGGGCATGAGGTAATTATTCCAGCACCCTATTGGGTTTCATATCCTGATATAGTTGCAC TTAGCACAGGTACACCTGTTTTTGTAAATTGCGGAATTGAACATAACTTTAAATTAAGTGCAGAAGCTTTAGAACGTTCA ATTACGGATAAAACTAAATGGCTTATTATTAACTCACCTAGTAATCCAACAGGTGCAAGCTATAACTTTGAAGAGCTAGA AAATATTGCTAAAGTTTTAAGAAAATATCCTCATGTGAACGTAATGTCCGATGATATTTATGAACATATTATTTTTGATG ATTTTAAATTTTATACATTAGCCCAAATAGCACCTGATTTAAAAGAGAGAATATTTACCGTAAACGGAGTATCTAAAGCT TATTCTATGACAGGTTGGCGTATAGGCTACGGCGTGGGCTCTAAAACTTTAATTAAAGCAATGACTATTATTCAGTCTCA AAGTACTTCAAACCCTTGTTCAATAAGTCAAATGGCTGCTATTGAAGCATTAAACGGTCCTCAAGATTATATAAAGCCTA ATGCCTTAAATTTTCAAAAAAAGCGTGATTTTGCTTTATCAATTTTGAAAAGAGTAAAATATTTTGAGTGCTATAAGCCG GAAGGTGCGTTTTACTTATTTGTTAAATGCGATAAAATATTGGGGCATAAAACTAGGTCAGGAAAAATAATTAGCAATAG TAATGATTTTGCCGAATATTTACTTGAAGAAGCAAAAGTTGCAGTGGTACCCGGTATCGCTTTCGGATTAGAGGGTTATT TTAGAATCTCTTATTCTACTTCTATGGAAGAGATAGAAGAAGCTTGTATGAGAATTGAGAGAGCTTGTAATGCTTTATAG
Upstream 100 bases:
>100_bases CCCGAGGAAGCGGGCATCCAGTACTTTAACTCGCTTTACTCTGGATTCCTGCTGTCGCAGGAATGACATCAAACTACCTC ATTAATACGGACTCAAAATT
Downstream 100 bases:
>100_bases TACTAAGCTTGTCATACCGCAGCTTGACCGCGGTATCTAAAAAAAATAATATTAACAATGTAAATCTTTATATGGATACC GCATTCAAGCCGCGGTATGA
Product: aspartate aminotransferase
Products: NA
Alternate protein names: AspAT; Transaminase A [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSIISTRLNSIKPSPTLAVVKKTLELKKSGIDIIALGAGEPDFDTPDNIKEAAIKAIQDGFTKYTNVEGMPLLKQAIKDK FKRENSIDYELDEIIVSTGGKQVIYNLFMASLDKGHEVIIPAPYWVSYPDIVALSTGTPVFVNCGIEHNFKLSAEALERS ITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHIIFDDFKFYTLAQIAPDLKERIFTVNGVSKA YSMTGWRIGYGVGSKTLIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQKKRDFALSILKRVKYFECYKP EGAFYLFVKCDKILGHKTRSGKIISNSNDFAEYLLEEAKVAVVPGIAFGLEGYFRISYSTSMEEIEEACMRIERACNAL
Sequences:
>Translated_399_residues MSIISTRLNSIKPSPTLAVVKKTLELKKSGIDIIALGAGEPDFDTPDNIKEAAIKAIQDGFTKYTNVEGMPLLKQAIKDK FKRENSIDYELDEIIVSTGGKQVIYNLFMASLDKGHEVIIPAPYWVSYPDIVALSTGTPVFVNCGIEHNFKLSAEALERS ITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHIIFDDFKFYTLAQIAPDLKERIFTVNGVSKA YSMTGWRIGYGVGSKTLIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQKKRDFALSILKRVKYFECYKP EGAFYLFVKCDKILGHKTRSGKIISNSNDFAEYLLEEAKVAVVPGIAFGLEGYFRISYSTSMEEIEEACMRIERACNAL >Mature_398_residues SIISTRLNSIKPSPTLAVVKKTLELKKSGIDIIALGAGEPDFDTPDNIKEAAIKAIQDGFTKYTNVEGMPLLKQAIKDKF KRENSIDYELDEIIVSTGGKQVIYNLFMASLDKGHEVIIPAPYWVSYPDIVALSTGTPVFVNCGIEHNFKLSAEALERSI TDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHIIFDDFKFYTLAQIAPDLKERIFTVNGVSKAY SMTGWRIGYGVGSKTLIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQKKRDFALSILKRVKYFECYKPE GAFYLFVKCDKILGHKTRSGKIISNSNDFAEYLLEEAKVAVVPGIAFGLEGYFRISYSTSMEEIEEACMRIERACNAL
Specific function: Unknown
COG id: COG0436
COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI95147551, Length=343, Percent_Identity=28.2798833819242, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI169881279, Length=343, Percent_Identity=28.2798833819242, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI56713256, Length=367, Percent_Identity=27.5204359673025, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI56713254, Length=367, Percent_Identity=27.5204359673025, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI4507369, Length=380, Percent_Identity=26.3157894736842, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI169881281, Length=339, Percent_Identity=24.4837758112094, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI149944424, Length=244, Percent_Identity=24.1803278688525, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI1788722, Length=404, Percent_Identity=30.4455445544554, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788627, Length=390, Percent_Identity=27.6923076923077, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1786816, Length=369, Percent_Identity=25.4742547425474, Blast_Score=121, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17567663, Length=377, Percent_Identity=26.525198938992, Blast_Score=139, Evalue=2e-33, Organism=Caenorhabditis elegans, GI71994472, Length=361, Percent_Identity=26.0387811634349, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71994476, Length=361, Percent_Identity=26.0387811634349, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17567369, Length=357, Percent_Identity=27.4509803921569, Blast_Score=123, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6322401, Length=365, Percent_Identity=26.027397260274, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6320317, Length=358, Percent_Identity=24.3016759776536, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6323118, Length=359, Percent_Identity=23.9554317548747, Blast_Score=74, Evalue=4e-14, Organism=Drosophila melanogaster, GI28573069, Length=357, Percent_Identity=24.9299719887955, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI24646114, Length=357, Percent_Identity=24.9299719887955, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI28573067, Length=357, Percent_Identity=24.9299719887955, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI28573065, Length=357, Percent_Identity=24.9299719887955, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI18859735, Length=385, Percent_Identity=22.8571428571429, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI24641770, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641760, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641768, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641766, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI24641764, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI45551451, Length=365, Percent_Identity=25.2054794520548, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR004838 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.1 [H]
Molecular weight: Translated: 44610; Mature: 44479
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIISTRLNSIKPSPTLAVVKKTLELKKSGIDIIALGAGEPDFDTPDNIKEAAIKAIQDG CCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH FTKYTNVEGMPLLKQAIKDKFKRENSIDYELDEIIVSTGGKQVIYNLFMASLDKGHEVII HHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE PAPYWVSYPDIVALSTGTPVFVNCGIEHNFKLSAEALERSITDKTKWLIINSPSNPTGAS ECCCEECCCCEEEEECCCCEEEECCCCCCCEECHHHHHHHHCCCEEEEEEECCCCCCCCC YNFEELENIAKVLRKYPHVNVMSDDIYEHIIFDDFKFYTLAQIAPDLKERIFTVNGVSKA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHCHHHHHHEEEECCCHHH YSMTGWRIGYGVGSKTLIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQK HHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCHH KRDFALSILKRVKYFECYKPEGAFYLFVKCDKILGHKTRSGKIISNSNDFAEYLLEEAKV HHHHHHHHHHHHHHHHEECCCCCEEEEEEECHHHCCCCCCCEEEECCCHHHHHHHHHCCE AVVPGIAFGLEGYFRISYSTSMEEIEEACMRIERACNAL EEECCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIISTRLNSIKPSPTLAVVKKTLELKKSGIDIIALGAGEPDFDTPDNIKEAAIKAIQDG CCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH FTKYTNVEGMPLLKQAIKDKFKRENSIDYELDEIIVSTGGKQVIYNLFMASLDKGHEVII HHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEE PAPYWVSYPDIVALSTGTPVFVNCGIEHNFKLSAEALERSITDKTKWLIINSPSNPTGAS ECCCEECCCCEEEEECCCCEEEECCCCCCCEECHHHHHHHHCCCEEEEEEECCCCCCCCC YNFEELENIAKVLRKYPHVNVMSDDIYEHIIFDDFKFYTLAQIAPDLKERIFTVNGVSKA CCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHCHHHHHHEEEECCCHHH YSMTGWRIGYGVGSKTLIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQK HHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCHH KRDFALSILKRVKYFECYKPEGAFYLFVKCDKILGHKTRSGKIISNSNDFAEYLLEEAKV HHHHHHHHHHHHHHHHEECCCCCEEEEEEECHHHCCCCCCCEEEECCCHHHHHHHHHCCE AVVPGIAFGLEGYFRISYSTSMEEIEEACMRIERACNAL EEECCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA