| Definition | Shewanella sediminis HAW-EB3, complete genome. |
|---|---|
| Accession | NC_009831 |
| Length | 5,517,674 |
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Identifier: 157374787
GI number:
Start: 1968966
End: 1973090
Strand: Reverse
Name: Not Available
Synonym: Ssed_1648
Alternate gene names: NA
Gene position: NA
Preceding gene: 157374798
Following gene: 157374786
Centisome position: NA
GC content: NA
Gene sequence:
>4125_bases ATGCTCAAATTCGCAGACATTCGTCTTCGTCCCAAAATGCTTGGATTGTTACTTATATTTGGTATTTTACCTATGATTGC AGTCGCAATTCATAGCAGTCGATTGAGCTCAGAAGCACTGATTGAAAAATCATATCAAGGGCTCAGTTCAATACAGTCAT TGAGAATCTCTGCTATCGATGATTTTTTCCGCGAACGCTTATCTGGGTTAGATACATTAGCTCATACGGGACAACTTAGT GAATTTATAGAACAGGTGGGTAGTGAACACGAAATATTACCCTCTATCATAGCTTCCCGTTACGATCCCTTTTTTACCTC CTTTGTAGACGATTATGGCTACGATGATCTGGTTATTCTTAAGCCTGAATCAGGAGAATTACTTTATTCATTAACTAATA GAAACCGGGTTGGAATCAAGCTCAGTGAATATACCGGTGATCCGGCTCTCAAGCAGGCTTGGTCAAAAACAATGAATACC CGCAAGCCCATTTTTTCAGACTTTGGCGTATTTAACGTAAACGACGAATCGAAGCGTCAGCAAAATGCTTACTTATCCAG CCCTATTTGGAACAGTAATGGTGAAATGACTGCCGTAATAGCAGTGAGAATTCTACCCGATTTAATCAATGATATTGTCA ATTCACGGATTGGAATGGGGGCAACGGGTGAGTCATACATTATTGGATTAGATAACCAAGATAGCCAAATAGAGTTACGT AGCGATATTACTACGATGGGCAATGGCAGCTATCGCGTAGGGTATCGCTTTGAAAAGGATTTAGATTATTGGAACGATGC GATAGATGCTGGCACCAGTGGGGGAAAAGATACCTATGTTGATAGTTCAGGCCATCCTGTTTTAGTCGTTTTTAATCAAC TCAATGTACCAGGGTATCAATGGTTTCTAATTTCAAAAATCAATGAAGATGAAGTTACCCACCCTATTACATCGCTTTAT CAAGCAGTGATAGTGGCAACTGCTGCATTGATTTTATTAGTGATATTTGTAGCCGTGAAATTTTCTCGTTCAGTCACAGA GCCACTTATTGAATCGATGAAGTTTGCCAAAGATATCTCTGCTGGCACCTTAAGTTCAAAATTGACCTTACAACGTAAAG ATGAACTTGGTGATCTTGGTATTGCCTTAAATGGTATGGCCGTACAACTGCGTGAGCTTGATTGGATTAAGTCAGGTAAA GAAGGGTTAGATGATAAATTACGTGGTGACATTGAGCTATCAGAACTCTCCAGCTTGTTTATTAATTTCTTTACTAAACA TATGGGTTGTCAGCTAGGGGCCTTATACCTATTTGAAGAGGAAAAATTACACCTCAGAGCCAGTTATTGCTTTACGGACA GACAAGGCAATTTCAACCAACTTGCACTTGGGGAGGGCATGGTAGGGCAAGCAGCATTGGAACAGGAGACCATTATATTC TCTGACATGACTCATGCTGCCCCCACATTAAACTATGGTGTTGGAGAAACAAGCTTAAAGAGCTTTATGTCGGTCCCCTT AATTGTGGATGGTCATCTCGTTGGCGTAGTGCTACTTGGCTCAACGGCACCTTTTACCTCACTGCAAAAGCAATTTGTAA AGGATGTGATTAATAGTGCCGCCATACTTTTTGATGCTGCAAATGCTCGCTTAGTCATTCGTACATTATTAGAACAAGCG CAAAAACAACAAGAGAACCTAAGTAAAGCCAATGATGGCTTGAAAGAATCTGAACAAGCATTGCAAAACCAACAAGAAGA GTTACGAGTCACCAATGAGGAGCTGGAAGAGCAAACCAAAGTGCTTAAAGAGTCAGAAGCTGAGCTACAAGCTCAACAGG AAGAACTTCGCGTTACTAACGAAGAGCTGGAAGAGCGAACTAAAGCACTGGAAGAGCAGCAAGTTGAGATGCAGGGGAAA AATGATCAACTGCATTTAGCTCAAAATGTCGTGGAAGAAAAAGCGAAAGAGTTAGCAAGCGCAAGTAAGTACAAATCTGA ATTTTTAGCGAATATGTCCCATGAACTGAGGACCCCACTCAACAGTATTCTCATTTTATCCCAGCTACTTGCCAGTAACA AAGCGGGCAACTTAAATGATAAACAGATTGAATCAGCCAAAGCCATTAACTCATCTGGATCTGATCTGCTATCGCTAATC AATGAAGTTTTGGATCTGTCCAAGGTTGAAGCGGGTAAGGTCGAACTGCAAATTGAAGATGTGAGCTTTCAAGAGATAGA GCAAGATATTAATCGCTTATACCAGGATATCGCTGTTGATAAAGGACTGTATTTCGATATTGCTCTTGCAGCCGATCTGC CGAATGAGATCAAAACTGACTCGTTGCGATTACAACAAATCTTGCGCAATCTACTAACCAATGCGTTTAAATTTACCCAT GAAGGCGCAGTAACTCTTAGCATTACTCAGCCAACAAATGAAGTTGCAGCACGCATGCAACAGCCTAAACAATCATTAGT CGCCTTTACGGTAAAAGATGACGGAATAGGAATTAAAAAAGAGAAGCAATTAGGCATCTTCCAAGCGTTCCAACAGGCTG ACGGTAGTACAAGTCGAAAATATGGCGGCACAGGTCTAGGATTATCGATATCTAAAGAGCTTACTCATCTATTAGGTGGG ACTATTTTACTGAAAAGTGACGAAGGCAAAGGTTGTGCGTTTACCGTTGTGCTGCCTCTTGAGTTTCAACCCAAAGATGA AGAAGCTGATAAGAGCATTTTTGGTATTCCTATCATGGAAAAAAGGGCACTAGAACCAGAAGAGCTGCAACCACTAAATA GCCAAGTTAAAAGTGATGCCGATATTAACACTAATAAACAGGCAGAAAACACAGATCTACAGCTGATATCCCAAGCGGCT GCAATCCCTAGTGTAAAGCTAAACGTAAAAGACGAAAGTTATATCGATGACGACAGGTTATCGATTGCCGCCGAAGATCA AACTTTGCTGATTATTGAAGATGACCGCGCCTTTGCCGGTGTGATGCGTGATTTTGGCCGCGAAAGAGGCTTTAAGTGTA TTGTCGCTGAAACAGGCGAAACAGGATTACATTTCGCCGATTATTATAAACCGAGTGCCATTATTTTAGATATTGGGCTA CCCGGTATTGATGGTTGGACAGTGATGGAGCGACTCAAAGAAAACTCAGAGTTACGCCATATACCAGTGCACTTCATGTC GGCGAGCGATAATAATCTCGATGCAATGAGAATGGGAGCAATTGGCTATCTAACTAAGCCGGTAGACCTGAACAAACTGA ATAAAACGTTTGGCGATATTGAGGAGATAATTGCTAAGTCAGTTAAGAAATTACTGATTGTCGAAGATGACGAAATTCAA AGGGAGAGTATTCGCCAGTTACTGGGTGAAGGTGATATTCACATTGTCGGCGTGGCAACAGGAAAACAAGCGCTACAAGA GCTAGAGACAAATCGATACGACTGTATGATCTTAGACTTAGGCCTTGAAGATCTATCCGGATTTGAGTTGCTCGATAAAA TTCGACGCAGTGATTCAGCAGCCAGAGTACCGATTATCGTCTATACGGGCCGAGAGTTAACCGTAGACGAAGAGAAAGAG CTCAGCCGTTATGCGGAAAGCATCATAATTAAAGGGGTTAAATCGCCAGAGCGCCTGTTAGACGAGTCAGCCCTCTTTTT ACATCGAGTAGAGTCTCGCCTGCCGGCAGAGCAACGGGGTATGTTGAAAGCCGTGCATGATAAAGAAACCGTGTTGGCTG GTAAGAAAATCTTGTTAGTCGATGATGATATGCGCAATGTTTTTGCGTTATCAAGCATTTTAGAAGACAAAGGTATTGAA ATCGTTGTTGGTCGTGATGGTCTGGAAAGTATCGAAAAATTGGACCAACATCCGGATATAGCCCTCATCTTAATGGACAT AATGATGCCAAAAATGGATGGTTATGATGCAATGAAAGAGATCCGTAAAAAACGTAAATACAAGAAACTACCTATTATCG CCCTGACAGCTAAAGCGATGAAAGGTGACCGAAGTAAGTGTATTGAGGCTGGAGCCAGTGATTATTTAGCTAAACCGGTC GACACCGATAAATTACTATCTATGTTACGAGTGTGGTTGTACTGA
Upstream 100 bases:
>100_bases ACAGATTAAGGTCAAAGTTATCTTGTTAAAGAGTTGAGTAAGTCAGCGACTTAGTAGAAAGTCATATTAATAAAAACTTA TGGTCTAATCAGGTGTGTTA
Downstream 100 bases:
>100_bases TATGTTTGAAGAGAACAAAACAGCGAACGAATATCTAGAAATCCAACTCTTGCTAGAAGCGATTTACCGTAAATATGGTT ATGATTTTAGAGAATATTCT
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1374_residues MLKFADIRLRPKMLGLLLIFGILPMIAVAIHSSRLSSEALIEKSYQGLSSIQSLRISAIDDFFRERLSGLDTLAHTGQLS EFIEQVGSEHEILPSIIASRYDPFFTSFVDDYGYDDLVILKPESGELLYSLTNRNRVGIKLSEYTGDPALKQAWSKTMNT RKPIFSDFGVFNVNDESKRQQNAYLSSPIWNSNGEMTAVIAVRILPDLINDIVNSRIGMGATGESYIIGLDNQDSQIELR SDITTMGNGSYRVGYRFEKDLDYWNDAIDAGTSGGKDTYVDSSGHPVLVVFNQLNVPGYQWFLISKINEDEVTHPITSLY QAVIVATAALILLVIFVAVKFSRSVTEPLIESMKFAKDISAGTLSSKLTLQRKDELGDLGIALNGMAVQLRELDWIKSGK EGLDDKLRGDIELSELSSLFINFFTKHMGCQLGALYLFEEEKLHLRASYCFTDRQGNFNQLALGEGMVGQAALEQETIIF SDMTHAAPTLNYGVGETSLKSFMSVPLIVDGHLVGVVLLGSTAPFTSLQKQFVKDVINSAAILFDAANARLVIRTLLEQA QKQQENLSKANDGLKESEQALQNQQEELRVTNEELEEQTKVLKESEAELQAQQEELRVTNEELEERTKALEEQQVEMQGK NDQLHLAQNVVEEKAKELASASKYKSEFLANMSHELRTPLNSILILSQLLASNKAGNLNDKQIESAKAINSSGSDLLSLI NEVLDLSKVEAGKVELQIEDVSFQEIEQDINRLYQDIAVDKGLYFDIALAADLPNEIKTDSLRLQQILRNLLTNAFKFTH EGAVTLSITQPTNEVAARMQQPKQSLVAFTVKDDGIGIKKEKQLGIFQAFQQADGSTSRKYGGTGLGLSISKELTHLLGG TILLKSDEGKGCAFTVVLPLEFQPKDEEADKSIFGIPIMEKRALEPEELQPLNSQVKSDADINTNKQAENTDLQLISQAA AIPSVKLNVKDESYIDDDRLSIAAEDQTLLIIEDDRAFAGVMRDFGRERGFKCIVAETGETGLHFADYYKPSAIILDIGL PGIDGWTVMERLKENSELRHIPVHFMSASDNNLDAMRMGAIGYLTKPVDLNKLNKTFGDIEEIIAKSVKKLLIVEDDEIQ RESIRQLLGEGDIHIVGVATGKQALQELETNRYDCMILDLGLEDLSGFELLDKIRRSDSAARVPIIVYTGRELTVDEEKE LSRYAESIIIKGVKSPERLLDESALFLHRVESRLPAEQRGMLKAVHDKETVLAGKKILLVDDDMRNVFALSSILEDKGIE IVVGRDGLESIEKLDQHPDIALILMDIMMPKMDGYDAMKEIRKKRKYKKLPIIALTAKAMKGDRSKCIEAGASDYLAKPV DTDKLLSMLRVWLY
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA