| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yicG [H]
Identifier: 157373095
GI number: 157373095
Start: 5385257
End: 5385874
Strand: Direct
Name: yicG [H]
Synonym: Spro_4863
Alternate gene names: 157373095
Gene position: 5385257-5385874 (Clockwise)
Preceding gene: 157373093
Following gene: 157373097
Centisome position: 98.83
GC content: 56.96
Gene sequence:
>618_bases ATGTTACTGAGCATTCTTTATATCATTGGCATCACTGCCGAAGCCATGACCGGCGCACTGGCCGCAGGCCGTCGCCAGAT GGATATGTTTGGCGTAATTATTATCGCTTCGGCCACCGCGATCGGTGGCGGTTCGGTACGCGATATGCTGCTCGGGCATT TTCCATTGGGGTGGGTCAAACATCCTGAATATATCGTTATCGTCGCCATTGCCGCGATTGTCACTACCTGGCTGGCCCCC CTGATGCGTCACCTGCGCCGCCTGTTCCTGGTATTGGATGCCGTTGGCCTGATTGTGTTTTCAATCATCGGTGCGCAGGT CGCGCTGGATATGGGCCATGGCGCCATCATCGCTGCGATTGCCGCCGTGATCACTGGCGTGTTCGGCGGCGTACTGCGCG ATATGCTCTGCAACCGCATTCCACTGGTTTTCCAGAAGGAAATCTATGCCGGTATCTCCTTTGGCGCCGCCTGGTTGTAT ATCGGCCTGCAACACTTCAGCCTGCCGCATAACCTGGTGGTGATCATCACGCTGGTCGTCGGCCTCAGCGCCCGCTTGCT CGCCCTGCGCTTTCGTCTGGGCCTGCCGGTATTTAATTACCAGCACCCGGATCATTAA
Upstream 100 bases:
>100_bases TCCGAAGCGTCACCGGTTAGAAAAACTCAGTAGCGATATATCCCGTCGGCGATTACCCTTCCACCATTACACCCATTCCC GCCCACCCTGTGAATACCTT
Downstream 100 bases:
>100_bases TAATGGTTCATCTCAAGGGCAACATATGCTGCGCCAGGTAGTCTACAAAGACCCTCACCTTTGGCAGCATATGGCGGCTT GATGGCCACAGGGCAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MLLSILYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHFPLGWVKHPEYIVIVAIAAIVTTWLAP LMRHLRRLFLVLDAVGLIVFSIIGAQVALDMGHGAIIAAIAAVITGVFGGVLRDMLCNRIPLVFQKEIYAGISFGAAWLY IGLQHFSLPHNLVVIITLVVGLSARLLALRFRLGLPVFNYQHPDH
Sequences:
>Translated_205_residues MLLSILYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHFPLGWVKHPEYIVIVAIAAIVTTWLAP LMRHLRRLFLVLDAVGLIVFSIIGAQVALDMGHGAIIAAIAAVITGVFGGVLRDMLCNRIPLVFQKEIYAGISFGAAWLY IGLQHFSLPHNLVVIITLVVGLSARLLALRFRLGLPVFNYQHPDH >Mature_205_residues MLLSILYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHFPLGWVKHPEYIVIVAIAAIVTTWLAP LMRHLRRLFLVLDAVGLIVFSIIGAQVALDMGHGAIIAAIAAVITGVFGGVLRDMLCNRIPLVFQKEIYAGISFGAAWLY IGLQHFSLPHNLVVIITLVVGLSARLLALRFRLGLPVFNYQHPDH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=205, Percent_Identity=75.1219512195122, Blast_Score=289, Evalue=1e-79, Organism=Escherichia coli, GI1786352, Length=209, Percent_Identity=40.1913875598086, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22116; Mature: 22116
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSILYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHFPLGWVK CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC HPEYIVIVAIAAIVTTWLAPLMRHLRRLFLVLDAVGLIVFSIIGAQVALDMGHGAIIAAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AAVITGVFGGVLRDMLCNRIPLVFQKEIYAGISFGAAWLYIGLQHFSLPHNLVVIITLVV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLSARLLALRFRLGLPVFNYQHPDH HHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure MLLSILYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHFPLGWVK CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC HPEYIVIVAIAAIVTTWLAPLMRHLRRLFLVLDAVGLIVFSIIGAQVALDMGHGAIIAAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AAVITGVFGGVLRDMLCNRIPLVFQKEIYAGISFGAAWLYIGLQHFSLPHNLVVIITLVV HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH GLSARLLALRFRLGLPVFNYQHPDH HHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]