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The map label for this gene is rfaF [H]

Identifier: 157373058

GI number: 157373058

Start: 5346040

End: 5347086

Strand: Direct

Name: rfaF [H]

Synonym: Spro_4826

Alternate gene names: 157373058

Gene position: 5346040-5347086 (Clockwise)

Preceding gene: 157373057

Following gene: 157373059

Centisome position: 98.11

GC content: 58.64

Gene sequence:

>1047_bases
ATGAAAATACTGGTTATCGGCCCTTCTTGGGTTGGCGATATGATGATGTCGCAAAGTCTCTACCGCACCCTGAAGGCCGA
GCACCCGACGGCAGAAATTGATGTGATGGCACCGGCCTGGTGTCGTCCATTACTGGCGCGCATGCCAGAGGTCAATCAGG
CCCTGTCGATGCCACTGGGCCACGGTGCGCTGGCACTCGGTGAACGTCGACGACTGGGGCATGCCCTGCGAGCCAACGGC
TACGATCGCGCCTATGTGCTGCCGAACTCGTTCAAATCTGCGCTGGTGCCCTTCTTTGCCAAGGTGCCGCAACGCACCGG
CTGGCGCGGGGAAATGCGCTATGGCGTGCTGAATGATATTCGCTTGCTGGACAAAGCCGCCTTCCCGCTGATGGTGCAGC
GTTACGTGGCACTGGCCTACGATAAACAACGCATTCAGCGCGCCGAAGATCTGCCGCAGCCGCTACTGTGGCCGCAACTG
CAGGTCAGCGACGAAGAGATTGCCGAAACTACCGCCGCCTTCAACCTGACCGATCATCGGCCGATTATCGGCTTTTGCCC
CGGCGCCGAATTTGGTCCGGCTAAACGCTGGCCGCACTATCACTATGCCGCTCTGGCGCAGAAGCTGATCGACCGGGGTT
ATCAAATCGCCCTGTTTGGCTCCGCCAAGGATAATGAAGCGGGTGAGCAGATACGGGCCGCGCTGGATGATGACTCCCGT
GGCTTTTGCATGAATCTGGCCGGGGAAACCCAGCTTGAGCAAGCGGTGATCCTGCTGGCTTCCTGTTCGGCCGTGGTCAG
TAACGACTCCGGTTTGATGCACGTAGCAGCCGCGTTGAATAAGCCGCTGATTGCCTTGTACGGCCCAAGCAGCCCGGACT
TCACGCCGCCGCTGTCCGACAAGGCCAAAGTGATCCGATTAATTAGCGGTTACCATAAGATACGCAAAGGCGATGCCGAT
CAGGGTTACCATCAGAGTCTGATCGATATTCAGCCACAGCAGGTGTTGGACGCGCTGACGCCGTTACTTGCCGCCAGCGA
GGAATAA

Upstream 100 bases:

>100_bases
CCGGCTATGACGCGCCGTTCAAAACGGTCGCCGAAGGCGTGAAAGAGTACATGGCCTGGTTAAACCGCACCGCTTAAGCT
GAAGGGATTTGACGTAGGGT

Downstream 100 bases:

>100_bases
ACATGCAGGTGTTGATTGTAAAAACTTCCTCCATGGGAGATGTGCTCCATACGCTGCCGGCGTTAACCGACGCGATGCGG
GCGATCCCCGGCATTCGCTT

Product: ADP-heptose:LPS heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLGHGALALGERRRLGHALRANG
YDRAYVLPNSFKSALVPFFAKVPQRTGWRGEMRYGVLNDIRLLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQL
QVSDEEIAETTAAFNLTDHRPIIGFCPGAEFGPAKRWPHYHYAALAQKLIDRGYQIALFGSAKDNEAGEQIRAALDDDSR
GFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSDKAKVIRLISGYHKIRKGDAD
QGYHQSLIDIQPQQVLDALTPLLAASEE

Sequences:

>Translated_348_residues
MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLGHGALALGERRRLGHALRANG
YDRAYVLPNSFKSALVPFFAKVPQRTGWRGEMRYGVLNDIRLLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQL
QVSDEEIAETTAAFNLTDHRPIIGFCPGAEFGPAKRWPHYHYAALAQKLIDRGYQIALFGSAKDNEAGEQIRAALDDDSR
GFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSDKAKVIRLISGYHKIRKGDAD
QGYHQSLIDIQPQQVLDALTPLLAASEE
>Mature_348_residues
MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLGHGALALGERRRLGHALRANG
YDRAYVLPNSFKSALVPFFAKVPQRTGWRGEMRYGVLNDIRLLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQL
QVSDEEIAETTAAFNLTDHRPIIGFCPGAEFGPAKRWPHYHYAALAQKLIDRGYQIALFGSAKDNEAGEQIRAALDDDSR
GFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSDKAKVIRLISGYHKIRKGDAD
QGYHQSLIDIQPQQVLDALTPLLAASEE

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=347, Percent_Identity=75.2161383285303, Blast_Score=561, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 38454; Mature: 38454

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLG
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCC
HGALALGERRRLGHALRANGYDRAYVLPNSFKSALVPFFAKVPQRTGWRGEMRYGVLNDI
CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RLLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQLQVSDEEIAETTAAFNLTDHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PIIGFCPGAEFGPAKRWPHYHYAALAQKLIDRGYQIALFGSAKDNEAGEQIRAALDDDSR
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC
GFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSD
CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCH
KAKVIRLISGYHKIRKGDADQGYHQSLIDIQPQQVLDALTPLLAASEE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKILVIGPSWVGDMMMSQSLYRTLKAEHPTAEIDVMAPAWCRPLLARMPEVNQALSMPLG
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHCCCHHHHHCCCCC
HGALALGERRRLGHALRANGYDRAYVLPNSFKSALVPFFAKVPQRTGWRGEMRYGVLNDI
CCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
RLLDKAAFPLMVQRYVALAYDKQRIQRAEDLPQPLLWPQLQVSDEEIAETTAAFNLTDHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
PIIGFCPGAEFGPAKRWPHYHYAALAQKLIDRGYQIALFGSAKDNEAGEQIRAALDDDSR
CEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCC
GFCMNLAGETQLEQAVILLASCSAVVSNDSGLMHVAAALNKPLIALYGPSSPDFTPPLSD
CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCH
KAKVIRLISGYHKIRKGDADQGYHQSLIDIQPQQVLDALTPLLAASEE
HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]