Click here to switch to the map view.

The map label for this gene is higB-1 [H]

Identifier: 157372546

GI number: 157372546

Start: 4784366

End: 4784593

Strand: Direct

Name: higB-1 [H]

Synonym: Spro_4313

Alternate gene names: 157372546

Gene position: 4784366-4784593 (Clockwise)

Preceding gene: 157372544

Following gene: 157372547

Centisome position: 87.81

GC content: 48.25

Gene sequence:

>228_bases
TTGATTCCTTCGACCATTGAACGCCAACTAGCCAGAAAACTCGATATGCTGGCCGCCGCTGAAAAAGAATGTGATTTACA
TAATCCGACCGGCAATTACTACAAACGCCTGTCCGGCACCTTTCAAGGTTGGTCCAGTATGCGGGTTAATATTCAATGGC
GCTTAATGTTCCGCTGGCGCAATGATGCCGCCGATCTGATTTACCTGGACCCACATCAAGATACCTAG

Upstream 100 bases:

>100_bases
ATGTTACACTCATTGGCCCAATGGAATGGGGAAGGAAATGATTTCGTCTTTCCGAGACAAATATTTGGCGCAATTCTATC
AGGAGGGTCGACACGATCGT

Downstream 100 bases:

>100_bases
GCAACGGAGAATATATGTTAGAGACCACAAGCCGAAAACCCACTACGGTGGGGGAAGTGCTGCAAGAAGAGTACTTAACA
CCGCTGGGTATCGGCCAGGA

Product: plasmid maintenance system killer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MIPSTIERQLARKLDMLAAAEKECDLHNPTGNYYKRLSGTFQGWSSMRVNIQWRLMFRWRNDAADLIYLDPHQDT

Sequences:

>Translated_75_residues
MIPSTIERQLARKLDMLAAAEKECDLHNPTGNYYKRLSGTFQGWSSMRVNIQWRLMFRWRNDAADLIYLDPHQDT
>Mature_75_residues
MIPSTIERQLARKLDMLAAAEKECDLHNPTGNYYKRLSGTFQGWSSMRVNIQWRLMFRWRNDAADLIYLDPHQDT

Specific function: Inhibits translation by cleavage of mRNA [H]

COG id: COG3549

COG function: function code R; Plasmid maintenance system killer protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007711 [H]

Pfam domain/function: PF05015 Plasmid_killer [H]

EC number: NA

Molecular weight: Translated: 8886; Mature: 8886

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPSTIERQLARKLDMLAAAEKECDLHNPTGNYYKRLSGTFQGWSSMRVNIQWRLMFRWR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEEEEEEC
NDAADLIYLDPHQDT
CCCCCEEEECCCCCC
>Mature Secondary Structure
MIPSTIERQLARKLDMLAAAEKECDLHNPTGNYYKRLSGTFQGWSSMRVNIQWRLMFRWR
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEEEEEEEEC
NDAADLIYLDPHQDT
CCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]