Click here to switch to the map view.

The map label for this gene is yjjJ [C]

Identifier: 157372544

GI number: 157372544

Start: 4781683

End: 4782939

Strand: Direct

Name: yjjJ [C]

Synonym: Spro_4311

Alternate gene names: 157372544

Gene position: 4781683-4782939 (Clockwise)

Preceding gene: 157372543

Following gene: 157372546

Centisome position: 87.76

GC content: 48.93

Gene sequence:

>1257_bases
ATGCTTGATATTCCTCTGCTGGTAAAACGTCGCCTGAGCGATGGCAATGTACAAAATGTGGGGCAACTGGCAGAAAATGC
CACCGGTGTTTATTTCCGTTACGACGAAAGCTATTTAGCCTCGCATCAGAGTTCACTTTCCCCCTTCAATTTGCCCTGGG
ATAACTTTTTGCATCAGGCACCAAAACAGCCGCATTACGGGTTAGAGGGCGTTTTTGCCGATAGCCTGCCGGACGGTTGG
GGGCTTTATTTGATGGATCGTGTATTTCGACAAAATGGCTACAATCCCAGAACAATTAGCGTATTGGAAAGGTTGGCCTT
CACCGGTGAACGTGGGTTTGGTGCTTTGTTTTATGAGCCTGACTTGCCATTATCCCGTCAGGAGAACAATCAAGATTTAA
CCTTGATAACACTGGGGAATGAGGCCGTTAAGGAGTTTGAAGGGACGGAGTCACACCTGATTGCTCATTTGATGGATGCC
GGGGGATCGGGGGGCGCGCGGCCAAAATTAAGCGTCACTCGCTTAGCTGATGGTACTTTTTCTAGCCAACAGGATGCTGT
CGGCAAGAAGCTTTTGGTAAAGCTAACCTCCGAGAAATTTGCCCTTGGGCATCGTGAAAGCCAGATCGAATACGTTTATA
TGATGATGGCGCGGCAAGCCGGTATTGAAGTCGCAGACTTTACTTTGATCGATATTGGCAAAGACCGTCATTGGCTTGAG
CAAGAACGCTTTGACTGCGTGGGTGACCATGGCCGTCGGCACATGATTTCTGCCAGCGGATTATTGGATGCCCCTTTTCG
TGAGCCTTCATTGGATTATGTCGATCTGATTAAAGCGACCCGAATACTCTGCGGTGTGGAAGAAGCCAGAAAATTACTAC
GCCGAGCCCTGTTCAATTATCTGACGGTAAATCAGGACGACCACGCCAAAAACTTTGCTTTTCTGGCGGATGATCAAGAC
AACTGGCGGCTATCCCCCTGTTATGACATCGTTTATAGCCCTTCGCCTTATGGTCAGCATATGACGGCTTTTAACGGTAA
CGGTTCGAAAATCACCGCATCAGCAATGACGATGATGGCCGGGCAGGCCGGTTTGGCCAACGCCAAGGCCGTAATGAATG
TGGCCGAAGAAATTTACAGCGTGGTAAGCCATTTCCAACAACAGGCTAATACGGTCGGGTTACCAACCGCATTAGCCAAA
GAGATTCAACGAGATATTGATGGGAAATGGCTGGCTCTACGCTCCGCCAATCAGTAA

Upstream 100 bases:

>100_bases
CAGTTCCTGATGCTCTATGACGCTCTTGGTGATCTGAATGAACTTCATCAACTGACCAGAACCCGCAATAGACCGCAAAC
TATTGAGGAGGTATTGAAAA

Downstream 100 bases:

>100_bases
CGTGCGCCGGATTTCACCGCTTTGAGGATCACGAACTTTTTGTTGGATGCGATCAGGGTGCAGTTACCGAACAAACGCTT
CAGCTTCTGGTGGTAATCCA

Product: HipA domain-containing protein

Products: NA

Alternate protein names: HipA Domain Protein; Xin-Antitoxin System Toxin Component HipA Family; HipA Protein; Hipa Domain Protein; HipA-Like C-Terminal Domain Family; HipA-Like Protein; HipA Family Protein; Protein With HipA-Like Domain; HipA-Family Phosphatidylinositol 3/4-Kinase; Hipa Protein; HipA-Like C-Terminal Domain-Containing; Protein Related Capsule Biosynthesis -Like; Transcriptional Regulator; Capsule Biosynthesis Protein HipA; Amidophosphoribosyl Transferase; HipA-Like N-Terminal Domain Family; Capsule Biosynthesis -Like Protein; HipA-Like; Orf_Bo

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MLDIPLLVKRRLSDGNVQNVGQLAENATGVYFRYDESYLASHQSSLSPFNLPWDNFLHQAPKQPHYGLEGVFADSLPDGW
GLYLMDRVFRQNGYNPRTISVLERLAFTGERGFGALFYEPDLPLSRQENNQDLTLITLGNEAVKEFEGTESHLIAHLMDA
GGSGGARPKLSVTRLADGTFSSQQDAVGKKLLVKLTSEKFALGHRESQIEYVYMMMARQAGIEVADFTLIDIGKDRHWLE
QERFDCVGDHGRRHMISASGLLDAPFREPSLDYVDLIKATRILCGVEEARKLLRRALFNYLTVNQDDHAKNFAFLADDQD
NWRLSPCYDIVYSPSPYGQHMTAFNGNGSKITASAMTMMAGQAGLANAKAVMNVAEEIYSVVSHFQQQANTVGLPTALAK
EIQRDIDGKWLALRSANQ

Sequences:

>Translated_418_residues
MLDIPLLVKRRLSDGNVQNVGQLAENATGVYFRYDESYLASHQSSLSPFNLPWDNFLHQAPKQPHYGLEGVFADSLPDGW
GLYLMDRVFRQNGYNPRTISVLERLAFTGERGFGALFYEPDLPLSRQENNQDLTLITLGNEAVKEFEGTESHLIAHLMDA
GGSGGARPKLSVTRLADGTFSSQQDAVGKKLLVKLTSEKFALGHRESQIEYVYMMMARQAGIEVADFTLIDIGKDRHWLE
QERFDCVGDHGRRHMISASGLLDAPFREPSLDYVDLIKATRILCGVEEARKLLRRALFNYLTVNQDDHAKNFAFLADDQD
NWRLSPCYDIVYSPSPYGQHMTAFNGNGSKITASAMTMMAGQAGLANAKAVMNVAEEIYSVVSHFQQQANTVGLPTALAK
EIQRDIDGKWLALRSANQ
>Mature_418_residues
MLDIPLLVKRRLSDGNVQNVGQLAENATGVYFRYDESYLASHQSSLSPFNLPWDNFLHQAPKQPHYGLEGVFADSLPDGW
GLYLMDRVFRQNGYNPRTISVLERLAFTGERGFGALFYEPDLPLSRQENNQDLTLITLGNEAVKEFEGTESHLIAHLMDA
GGSGGARPKLSVTRLADGTFSSQQDAVGKKLLVKLTSEKFALGHRESQIEYVYMMMARQAGIEVADFTLIDIGKDRHWLE
QERFDCVGDHGRRHMISASGLLDAPFREPSLDYVDLIKATRILCGVEEARKLLRRALFNYLTVNQDDHAKNFAFLADDQD
NWRLSPCYDIVYSPSPYGQHMTAFNGNGSKITASAMTMMAGQAGLANAKAVMNVAEEIYSVVSHFQQQANTVGLPTALAK
EIQRDIDGKWLALRSANQ

Specific function: Unknown

COG id: COG3550

COG function: function code R; Uncharacterized protein related to capsule biosynthesis enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46659; Mature: 46659

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDIPLLVKRRLSDGNVQNVGQLAENATGVYFRYDESYLASHQSSLSPFNLPWDNFLHQA
CCCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHC
PKQPHYGLEGVFADSLPDGWGLYLMDRVFRQNGYNPRTISVLERLAFTGERGFGALFYEP
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECC
DLPLSRQENNQDLTLITLGNEAVKEFEGTESHLIAHLMDAGGSGGARPKLSVTRLADGTF
CCCCCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
SSQQDAVGKKLLVKLTSEKFALGHRESQIEYVYMMMARQAGIEVADFTLIDIGKDRHWLE
CCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHH
QERFDCVGDHGRRHMISASGLLDAPFREPSLDYVDLIKATRILCGVEEARKLLRRALFNY
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LTVNQDDHAKNFAFLADDQDNWRLSPCYDIVYSPSPYGQHMTAFNGNGSKITASAMTMMA
HCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCCCCEEEECCCCCEEEHHHHHHHH
GQAGLANAKAVMNVAEEIYSVVSHFQQQANTVGLPTALAKEIQRDIDGKWLALRSANQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCC
>Mature Secondary Structure
MLDIPLLVKRRLSDGNVQNVGQLAENATGVYFRYDESYLASHQSSLSPFNLPWDNFLHQA
CCCCCHHHHHHCCCCCHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCHHHHHHHC
PKQPHYGLEGVFADSLPDGWGLYLMDRVFRQNGYNPRTISVLERLAFTGERGFGALFYEP
CCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECC
DLPLSRQENNQDLTLITLGNEAVKEFEGTESHLIAHLMDAGGSGGARPKLSVTRLADGTF
CCCCCCCCCCCCEEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
SSQQDAVGKKLLVKLTSEKFALGHRESQIEYVYMMMARQAGIEVADFTLIDIGKDRHWLE
CCHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHH
QERFDCVGDHGRRHMISASGLLDAPFREPSLDYVDLIKATRILCGVEEARKLLRRALFNY
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LTVNQDDHAKNFAFLADDQDNWRLSPCYDIVYSPSPYGQHMTAFNGNGSKITASAMTMMA
HCCCCCCCCCCEEEEECCCCCCEECCCEEEEECCCCCCCCEEEECCCCCEEEHHHHHHHH
GQAGLANAKAVMNVAEEIYSVVSHFQQQANTVGLPTALAKEIQRDIDGKWLALRSANQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA