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The map label for this gene is ygiM [H]

Identifier: 157372525

GI number: 157372525

Start: 4759290

End: 4759910

Strand: Direct

Name: ygiM [H]

Synonym: Spro_4292

Alternate gene names: 157372525

Gene position: 4759290-4759910 (Clockwise)

Preceding gene: 157372520

Following gene: 157372526

Centisome position: 87.34

GC content: 55.72

Gene sequence:

>621_bases
ATGCAGAAATTACGCCTGATTTGCCTTGCCGTGCTGAGCTTCAGCATCACTTGGGGCGCCCATGCCGAAGATAAACGCTA
TATCTCCGATGAATTGAATACTTACGTCCACAGCGGCCCGGGTAATCAGTACCGTATTGTCGGCACCTTGAACGCCGGTG
AAGAAGTGACCCTGTTGAGCGTAAACGACAGCACCAACTATGGCCAGATCCGCGATGCCAAGGGCCGCAACACCTGGATC
CCGTTGGATCAGCTTAGCCAGACCCCAAGCCTGCGCACTCAGGTGCCCGCGCTGGAGCAGCAGGTCAAAACCCTGACCGA
TAAACTGGCCAATATCGACAACAGCTGGAACCAGCGTACCGCTGAAATGCAGCAGAAAGTGGCCGGCAGCGACAGCACCA
TCAGCGGCCTGCAGCAGGAAAACCAGGATCTGAAAAACCAGCTGGTAGTGGCGCAGAAAAAGGTTAACGCGGTTAACCTG
CAGCTCGACGACAAACAGCGCACCATTATCCTGCAGTGGTTTATGTACGGCGGTGGCGTGGCTGGCGTAGGCCTGCTGTT
GGGTCTGCTGTTACCACACCTGATCCCGCGTCGTAAAAGCAACAACCGCTGGATGAACTGA

Upstream 100 bases:

>100_bases
CTGCCACAGTAAGATAGTTCTCATTCCGGTTTTAGCGTTGCGTCGTCAGACTGAACGCTCTACTATCGTTCCCATAAATT
CACACAGAAACGATGAACTA

Downstream 100 bases:

>100_bases
TTAAAGTATCGTTCGGTTTGAGATTGGGCGCCTGCGGGGCGCCCTTTTTATTGGTTTCGGCAGCGCCCCGCTAATTGAGG
TAATCTGGTCAACAGAGCCT

Product: putative signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MQKLRLICLAVLSFSITWGAHAEDKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVTLLSVNDSTNYGQIRDAKGRNTWI
PLDQLSQTPSLRTQVPALEQQVKTLTDKLANIDNSWNQRTAEMQQKVAGSDSTISGLQQENQDLKNQLVVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGVGLLLGLLLPHLIPRRKSNNRWMN

Sequences:

>Translated_206_residues
MQKLRLICLAVLSFSITWGAHAEDKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVTLLSVNDSTNYGQIRDAKGRNTWI
PLDQLSQTPSLRTQVPALEQQVKTLTDKLANIDNSWNQRTAEMQQKVAGSDSTISGLQQENQDLKNQLVVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGVGLLLGLLLPHLIPRRKSNNRWMN
>Mature_206_residues
MQKLRLICLAVLSFSITWGAHAEDKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVTLLSVNDSTNYGQIRDAKGRNTWI
PLDQLSQTPSLRTQVPALEQQVKTLTDKLANIDNSWNQRTAEMQQKVAGSDSTISGLQQENQDLKNQLVVAQKKVNAVNL
QLDDKQRTIILQWFMYGGGVAGVGLLLGLLLPHLIPRRKSNNRWMN

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=206, Percent_Identity=70.873786407767, Blast_Score=280, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 23083; Mature: 23083

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLRLICLAVLSFSITWGAHAEDKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVTLLS
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCEEEEEEEECCCCEEEEEE
VNDSTNYGQIRDAKGRNTWIPLDQLSQTPSLRTQVPALEQQVKTLTDKLANIDNSWNQRT
ECCCCCCCCEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AEMQQKVAGSDSTISGLQQENQDLKNQLVVAQKKVNAVNLQLDDKQRTIILQWFMYGGGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEHHCCCH
AGVGLLLGLLLPHLIPRRKSNNRWMN
HHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQKLRLICLAVLSFSITWGAHAEDKRYISDELNTYVHSGPGNQYRIVGTLNAGEEVTLLS
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCEEEEEEEECCCCEEEEEE
VNDSTNYGQIRDAKGRNTWIPLDQLSQTPSLRTQVPALEQQVKTLTDKLANIDNSWNQRT
ECCCCCCCCEECCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
AEMQQKVAGSDSTISGLQQENQDLKNQLVVAQKKVNAVNLQLDDKQRTIILQWFMYGGGV
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEHHCCCH
AGVGLLLGLLLPHLIPRRKSNNRWMN
HHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]