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The map label for this gene is scrY [H]

Identifier: 157372437

GI number: 157372437

Start: 4661242

End: 4662651

Strand: Direct

Name: scrY [H]

Synonym: Spro_4204

Alternate gene names: 157372437

Gene position: 4661242-4662651 (Clockwise)

Preceding gene: 157372436

Following gene: 157372438

Centisome position: 85.55

GC content: 55.67

Gene sequence:

>1410_bases
ATGAAAAAACTTGGCTATCTGGCAGTCACTACAGGGCTTCTCATCTCTACCTCTGCGGCCGCGACTGGTACCAATACCAG
TATCGAAGCCCGTCTGAATGCGCTGGAACAACGGCTGCAACAGGCCGAGCAGCGAGCTGTCCAGGCGGAAACGCGTGCCA
CGGCGGCGGAACGCAAGGCACAACAGTTGGAATTACGCACCGCCAACACCGAGCAGCAAACCCAACAGGTTGTTCAGCGC
ACCGCGACGCTGGAAACCCACGCCGCACCGGCCGGCAAGCTGCAACTCACCGGATTAACCGACCTGAAACTGTACGGCGA
CGTCGAGTTCAACCTGGACGGCGCCAGCCGCAGCGGCCAGCTCACCTCGCTGAAAAGCAGCGACAACAAAGACTGGAAGC
CGGGCAACAAAGAACGTTGGGATATCAACGGCCGCATTCTGGTCGGTGTAGACGGCTACCGACGCAACCCGGACGGCAAC
TTCTCCGGTTTCAGCGTGCAGCCGCTGGCCGACATGACCGGTAAAATGAACCTCGACGATGCCGCCTTCTTCTTCGGTAA
CGAAAAGAACTGGCAGACCAAAATTGGCCGTTTTGAAGCCTACGACATGTTCCCGCTCAATCAGGACACCTTCATCCAGT
ATTCCGGCAATACCGCCAACGATCTGTATGCCGACGGTTTTGGCTATATCTACATGATGAAAGAAGGTCGTGGGCGTAGC
AGCAGCGGCGGCAACCTGATGCTGAGCAAGTATGCCGGTAACTTCTACTTCGAACTCAATACGCTGGTGGAGGACGGTAC
CTCACTGTTCCAGGACGACGCCTACCACGGCAATAGCCTGGATAATAAGAAAAATGTCGCCTACCTGCGGCCGGTGATCG
CCTGGAAAAAAGACCAGCTCAGCGCGGCAGTGGCGATGGAAAGCAACGTGGTCAACAATGCCTACGGCTATCACGACAGC
CAGGGGCAATTCGTCGACCAGTCCAAACGTAACGGCTACGGCATGACTCTCAGTTGGAACAATACCGCCGCCAACCCGGA
CAACGGCGTGGTTGCCAACCTGAGCACCGCCTACCTGGACGCCTCCGGCGAGCAGGACCTGACCGCCGGTATCAACGTAC
TGTGGCGTCGCTTTGAAGTGGGTTACATCTATGCCCACAACAACATCAAAGAGTTCAATACCGCCGGTATGAGCGCCGAC
ATCAGCAACCCGCTCAGCGAGCCGGGCAAATATGATATTCATACCATTCATACCTCGTACCAAATACCAAACATCATGAA
TATGAAGAACTTTAACCTGTATCTCGGGGCCTACGTCTCGATGCTGGAGGCCAATGCAGATAACAAAATTGCCAACTCCA
GCAACGATCAGCGCTACGGCGTACGTGCCCGGTTCAAGTACTTCTTCTGA

Upstream 100 bases:

>100_bases
TGATTGCCAGCCGTCGCTCAACTCACTATCTTTCATCCTGAAAAACCGGTTTAGCAATTTAGCAAAAAATAATAACAACC
ACCCCGGATGATAGAAAATC

Downstream 100 bases:

>100_bases
CGCTGATGAACTGATTTCCGCCGCGAAACACCGCGGCGGCATTTTTATTGATTAAGGGAGTGAACATGGACATTACCGCA
ACCGCTAACGCGCTATTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MKKLGYLAVTTGLLISTSAAATGTNTSIEARLNALEQRLQQAEQRAVQAETRATAAERKAQQLELRTANTEQQTQQVVQR
TATLETHAAPAGKLQLTGLTDLKLYGDVEFNLDGASRSGQLTSLKSSDNKDWKPGNKERWDINGRILVGVDGYRRNPDGN
FSGFSVQPLADMTGKMNLDDAAFFFGNEKNWQTKIGRFEAYDMFPLNQDTFIQYSGNTANDLYADGFGYIYMMKEGRGRS
SSGGNLMLSKYAGNFYFELNTLVEDGTSLFQDDAYHGNSLDNKKNVAYLRPVIAWKKDQLSAAVAMESNVVNNAYGYHDS
QGQFVDQSKRNGYGMTLSWNNTAANPDNGVVANLSTAYLDASGEQDLTAGINVLWRRFEVGYIYAHNNIKEFNTAGMSAD
ISNPLSEPGKYDIHTIHTSYQIPNIMNMKNFNLYLGAYVSMLEANADNKIANSSNDQRYGVRARFKYFF

Sequences:

>Translated_469_residues
MKKLGYLAVTTGLLISTSAAATGTNTSIEARLNALEQRLQQAEQRAVQAETRATAAERKAQQLELRTANTEQQTQQVVQR
TATLETHAAPAGKLQLTGLTDLKLYGDVEFNLDGASRSGQLTSLKSSDNKDWKPGNKERWDINGRILVGVDGYRRNPDGN
FSGFSVQPLADMTGKMNLDDAAFFFGNEKNWQTKIGRFEAYDMFPLNQDTFIQYSGNTANDLYADGFGYIYMMKEGRGRS
SSGGNLMLSKYAGNFYFELNTLVEDGTSLFQDDAYHGNSLDNKKNVAYLRPVIAWKKDQLSAAVAMESNVVNNAYGYHDS
QGQFVDQSKRNGYGMTLSWNNTAANPDNGVVANLSTAYLDASGEQDLTAGINVLWRRFEVGYIYAHNNIKEFNTAGMSAD
ISNPLSEPGKYDIHTIHTSYQIPNIMNMKNFNLYLGAYVSMLEANADNKIANSSNDQRYGVRARFKYFF
>Mature_469_residues
MKKLGYLAVTTGLLISTSAAATGTNTSIEARLNALEQRLQQAEQRAVQAETRATAAERKAQQLELRTANTEQQTQQVVQR
TATLETHAAPAGKLQLTGLTDLKLYGDVEFNLDGASRSGQLTSLKSSDNKDWKPGNKERWDINGRILVGVDGYRRNPDGN
FSGFSVQPLADMTGKMNLDDAAFFFGNEKNWQTKIGRFEAYDMFPLNQDTFIQYSGNTANDLYADGFGYIYMMKEGRGRS
SSGGNLMLSKYAGNFYFELNTLVEDGTSLFQDDAYHGNSLDNKKNVAYLRPVIAWKKDQLSAAVAMESNVVNNAYGYHDS
QGQFVDQSKRNGYGMTLSWNNTAANPDNGVVANLSTAYLDASGEQDLTAGINVLWRRFEVGYIYAHNNIKEFNTAGMSAD
ISNPLSEPGKYDIHTIHTSYQIPNIMNMKNFNLYLGAYVSMLEANADNKIANSSNDQRYGVRARFKYFF

Specific function: Porin for sucrose uptake [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the porin LamB (TC 1.B.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003192
- ProDom:   PD008788 [H]

Pfam domain/function: PF02264 LamB [H]

EC number: NA

Molecular weight: Translated: 52124; Mature: 52124

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLGYLAVTTGLLISTSAAATGTNTSIEARLNALEQRLQQAEQRAVQAETRATAAERKA
CCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLELRTANTEQQTQQVVQRTATLETHAAPAGKLQLTGLTDLKLYGDVEFNLDGASRSGQ
HHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEEEEEECCCCCCCC
LTSLKSSDNKDWKPGNKERWDINGRILVGVDGYRRNPDGNFSGFSVQPLADMTGKMNLDD
EEEECCCCCCCCCCCCCCEEEECCEEEEEECCCEECCCCCCCCEEECCHHHCCCCCCCCC
AAFFFGNEKNWQTKIGRFEAYDMFPLNQDTFIQYSGNTANDLYADGFGYIYMMKEGRGRS
EEEEECCCCCCHHHCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCEEEEEEECCCCCC
SSGGNLMLSKYAGNFYFELNTLVEDGTSLFQDDAYHGNSLDNKKNVAYLRPVIAWKKDQL
CCCCCEEEEEECCEEEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCHHHH
SAAVAMESNVVNNAYGYHDSQGQFVDQSKRNGYGMTLSWNNTAANPDNGVVANLSTAYLD
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEC
ASGEQDLTAGINVLWRRFEVGYIYAHNNIKEFNTAGMSADISNPLSEPGKYDIHTIHTSY
CCCCCCHHHHHHHHEEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
QIPNIMNMKNFNLYLGAYVSMLEANADNKIANSSNDQRYGVRARFKYFF
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCEECEEEEEEECC
>Mature Secondary Structure
MKKLGYLAVTTGLLISTSAAATGTNTSIEARLNALEQRLQQAEQRAVQAETRATAAERKA
CCCCEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQLELRTANTEQQTQQVVQRTATLETHAAPAGKLQLTGLTDLKLYGDVEFNLDGASRSGQ
HHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEEEEEEEEECCCCCCCC
LTSLKSSDNKDWKPGNKERWDINGRILVGVDGYRRNPDGNFSGFSVQPLADMTGKMNLDD
EEEECCCCCCCCCCCCCCEEEECCEEEEEECCCEECCCCCCCCEEECCHHHCCCCCCCCC
AAFFFGNEKNWQTKIGRFEAYDMFPLNQDTFIQYSGNTANDLYADGFGYIYMMKEGRGRS
EEEEECCCCCCHHHCCCEEEEEECCCCCCCEEEECCCCCCCEEECCCEEEEEEECCCCCC
SSGGNLMLSKYAGNFYFELNTLVEDGTSLFQDDAYHGNSLDNKKNVAYLRPVIAWKKDQL
CCCCCEEEEEECCEEEEEEEEHHHCCHHHHHCCCCCCCCCCCCCCEEEEEHHHHCCHHHH
SAAVAMESNVVNNAYGYHDSQGQFVDQSKRNGYGMTLSWNNTAANPDNGVVANLSTAYLD
HEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEC
ASGEQDLTAGINVLWRRFEVGYIYAHNNIKEFNTAGMSADISNPLSEPGKYDIHTIHTSY
CCCCCCHHHHHHHHEEEEEEEEEEEECCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
QIPNIMNMKNFNLYLGAYVSMLEANADNKIANSSNDQRYGVRARFKYFF
CCCCCCCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCCEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1846143; 1649946; 9437428 [H]