| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is plcN [H]
Identifier: 157372431
GI number: 157372431
Start: 4652173
End: 4654320
Strand: Direct
Name: plcN [H]
Synonym: Spro_4198
Alternate gene names: 157372431
Gene position: 4652173-4654320 (Clockwise)
Preceding gene: 157372430
Following gene: 157372433
Centisome position: 85.38
GC content: 60.47
Gene sequence:
>2148_bases ATGCCTGATTTTTCGCGCAGAGAAATACTGCGGGCTGCCGCCATCGGATCGGCTTTTTCACTGTTACCCGCCTCGATCCG CAAAGCGCTGGCAATCCCCGCCAATAATCGTACCGGCACCCTTAACGATGTCGAACACGTGGTGATCCTGATGCAGGAAA ACCGTTCTTTCGACCATTACTTCGGCACCTTGCCCGGCGTACGCGGCTTTAGCGATCGCATCACCATTCCTTTGCCCGGT GGCCGTCACGTCTGGCAACAGCAGGGGGAACATCGGCTGGTGCTGCCCTATCATCTCGACAGCAAGCTCGGCAATGCCCA ACGGGTAAGCGGCACGCCGCATTCGTGGGTAGATGAACAATCCGCCTGGGATAACGGCCGCATGAGCGCCTGGCCGACCT ACAAAACGCCCACCTCGATGGGCTATTACCGTCGGCACGAATTGCCGTTCCAGTTTGCGCTGGCCGAAACCTTCACCCTG TGCGACGCCTATCATTGCTCGATCCACGCCGGGACCAACACCAACCGCCTGTTCCACTGGACCGGCACCAATGGCCCGAC GGCGGCCGAGGTCGCGGTGGTGGTCAACGAGTGGGACAGCCCCGGCCCGGCGGAAGTCGGCTACCAGTGGCAGACCTATC CGGAGCGGCTGGAGGCCGGCGGCGTCAGTTGGAAGGTCTATCAGTTTTTGCCTGATAACTTCACCGACAACCCACTGGCG GGATTCCGCCAGTACCGTGCCGCCAGCGTTAAGGTCGGCAACCCGGCACAGCCGCCAAAAGACTTCACCGCCTTTGTACC CTATAGCGATGAATTGAACGTTGAAGCCCCGCTGTACAAGGGCAATGGCAATACGCTGCCGGCAGCCGACGGCAACGATC TGGATGCGATGCTGACCGGCTTTCGTAACGACGTACAGCAGGGCAAGCTGCCGCAGGTAAGCTGGATTATCGCCCCGGCG GCCTACTCGGAGCACCCCGGGCCTTCCAGCCCGGTGCAGGGCGGCTGGTTTACCCAGGAGATCCTCAATGCGCTGACGGA TAACCCGGAGGTGTGGAGCAAGACCGTGCTGCTGGTCAATTACGACGAAAACGACGGTTTCTTCGACCATATGCCTTCGC CCTCGGCCCCGTCACTGCGTGAAGACGGCAGCTTCGCCGGTAAATCGACGGTGCCGTTCGATAGTGAAATCTTTCAGCAT GTCGCCCCACCCGGTTCACAAGAGCAACCGCCACCGGACGGCCGTATCTATGGCCCAGGGCCGCGAGTACCGATGTTGGT GCTGTCTCCCTGGAGCCGTGGCGGCTGGGTCAATTCACAGGTATTCGACCACACCTCGGTACTGCAATTTTTAGAAAAAC GTTTCCAGGTGCATGAACCGAACATCAGCGCCTGGCGACGGGCGGTCTGTGGTGACCTCACTTCCGCCTTCAACTTTGTC GACCCTAATGAGGAAACCTTGCCTCGTCTGCCCACCACCAGTCGCCACGCCGCCGACAGTCTGCGCCAGCGACAGGAACA GTTACCGCAGGTGCCCTTGCCGCCGGTGAACAGGCAACAGTTACCGCATCAGTCGCGACTGGCACGCCCATCGCGTGCGC TGCCTTACCAGCTGCACGTTGAGGCCAGCAGCAACCCCGAGCAAAAAATGCTGACGCTCAACCTGTACAACACTGGCGAA CAGGGCGTGGTCTTTCATGTGTATGACCTGCTGAGTCTGGAGCAGATCCCACGGCGCTATACCGTCGAGGCCGGTAAAGC GGTCAGTGACAACTGGCTAACGGCGGATCGCTACCACCTGTGGTTGCTAGGCCCCAACGGTTTTCATCGTGAGCTGGGTG GCAGCGTTCTGCAGCCGCAGCCGGAAGTGCAACTCACCCCGCAGGGCGATCGTTTATCGCTAACGCTAACCAACGCGGGT AGCCAGGCAACAACGGTAACCATCGCCCGCTGCCCTTATACGCAAAAAGGCCCCTGGCAGATTGAACTGCCGGCGGGTGG CCGCCATCAGCAGGCCTTTGCTACCAAATCCAGCGGTGGCTGGTACGATCTTTCACTGCAGGGGGCACAGGGCTGGCAAC GCCGACTGGCAGGCCGGCTGGAGAACGGCGACCACAGCGTCAGCGATCCGTTAATGGGTAAAGCCTGA
Upstream 100 bases:
>100_bases CCCGGGGGCATTATTTCTCCCCGTCATCTGTTTGTTATTTTTCGCCATTACCGTCGTTAACAACTATCTTCAAAACACCC CACAGGGAGATTAACGACGC
Downstream 100 bases:
>100_bases GATTTCCGTGCAGGGTGTTCGAAAGGAGAATTCCCTTTAGCGGCAGTACAAGCGGAACAGGCGCGCCAGGTGTGCGCCCA TCGGCGTCAGCGTGGTGTCT
Product: phospholipase C
Products: NA
Alternate protein names: PLC-N; Phosphatidylcholine cholinephosphohydrolase; Phosphatidylcholine-hydrolyzing phospholipase C; PC-PLC [H]
Number of amino acids: Translated: 715; Mature: 714
Protein sequence:
>715_residues MPDFSRREILRAAAIGSAFSLLPASIRKALAIPANNRTGTLNDVEHVVILMQENRSFDHYFGTLPGVRGFSDRITIPLPG GRHVWQQQGEHRLVLPYHLDSKLGNAQRVSGTPHSWVDEQSAWDNGRMSAWPTYKTPTSMGYYRRHELPFQFALAETFTL CDAYHCSIHAGTNTNRLFHWTGTNGPTAAEVAVVVNEWDSPGPAEVGYQWQTYPERLEAGGVSWKVYQFLPDNFTDNPLA GFRQYRAASVKVGNPAQPPKDFTAFVPYSDELNVEAPLYKGNGNTLPAADGNDLDAMLTGFRNDVQQGKLPQVSWIIAPA AYSEHPGPSSPVQGGWFTQEILNALTDNPEVWSKTVLLVNYDENDGFFDHMPSPSAPSLREDGSFAGKSTVPFDSEIFQH VAPPGSQEQPPPDGRIYGPGPRVPMLVLSPWSRGGWVNSQVFDHTSVLQFLEKRFQVHEPNISAWRRAVCGDLTSAFNFV DPNEETLPRLPTTSRHAADSLRQRQEQLPQVPLPPVNRQQLPHQSRLARPSRALPYQLHVEASSNPEQKMLTLNLYNTGE QGVVFHVYDLLSLEQIPRRYTVEAGKAVSDNWLTADRYHLWLLGPNGFHRELGGSVLQPQPEVQLTPQGDRLSLTLTNAG SQATTVTIARCPYTQKGPWQIELPAGGRHQQAFATKSSGGWYDLSLQGAQGWQRRLAGRLENGDHSVSDPLMGKA
Sequences:
>Translated_715_residues MPDFSRREILRAAAIGSAFSLLPASIRKALAIPANNRTGTLNDVEHVVILMQENRSFDHYFGTLPGVRGFSDRITIPLPG GRHVWQQQGEHRLVLPYHLDSKLGNAQRVSGTPHSWVDEQSAWDNGRMSAWPTYKTPTSMGYYRRHELPFQFALAETFTL CDAYHCSIHAGTNTNRLFHWTGTNGPTAAEVAVVVNEWDSPGPAEVGYQWQTYPERLEAGGVSWKVYQFLPDNFTDNPLA GFRQYRAASVKVGNPAQPPKDFTAFVPYSDELNVEAPLYKGNGNTLPAADGNDLDAMLTGFRNDVQQGKLPQVSWIIAPA AYSEHPGPSSPVQGGWFTQEILNALTDNPEVWSKTVLLVNYDENDGFFDHMPSPSAPSLREDGSFAGKSTVPFDSEIFQH VAPPGSQEQPPPDGRIYGPGPRVPMLVLSPWSRGGWVNSQVFDHTSVLQFLEKRFQVHEPNISAWRRAVCGDLTSAFNFV DPNEETLPRLPTTSRHAADSLRQRQEQLPQVPLPPVNRQQLPHQSRLARPSRALPYQLHVEASSNPEQKMLTLNLYNTGE QGVVFHVYDLLSLEQIPRRYTVEAGKAVSDNWLTADRYHLWLLGPNGFHRELGGSVLQPQPEVQLTPQGDRLSLTLTNAG SQATTVTIARCPYTQKGPWQIELPAGGRHQQAFATKSSGGWYDLSLQGAQGWQRRLAGRLENGDHSVSDPLMGKA >Mature_714_residues PDFSRREILRAAAIGSAFSLLPASIRKALAIPANNRTGTLNDVEHVVILMQENRSFDHYFGTLPGVRGFSDRITIPLPGG RHVWQQQGEHRLVLPYHLDSKLGNAQRVSGTPHSWVDEQSAWDNGRMSAWPTYKTPTSMGYYRRHELPFQFALAETFTLC DAYHCSIHAGTNTNRLFHWTGTNGPTAAEVAVVVNEWDSPGPAEVGYQWQTYPERLEAGGVSWKVYQFLPDNFTDNPLAG FRQYRAASVKVGNPAQPPKDFTAFVPYSDELNVEAPLYKGNGNTLPAADGNDLDAMLTGFRNDVQQGKLPQVSWIIAPAA YSEHPGPSSPVQGGWFTQEILNALTDNPEVWSKTVLLVNYDENDGFFDHMPSPSAPSLREDGSFAGKSTVPFDSEIFQHV APPGSQEQPPPDGRIYGPGPRVPMLVLSPWSRGGWVNSQVFDHTSVLQFLEKRFQVHEPNISAWRRAVCGDLTSAFNFVD PNEETLPRLPTTSRHAADSLRQRQEQLPQVPLPPVNRQQLPHQSRLARPSRALPYQLHVEASSNPEQKMLTLNLYNTGEQ GVVFHVYDLLSLEQIPRRYTVEAGKAVSDNWLTADRYHLWLLGPNGFHRELGGSVLQPQPEVQLTPQGDRLSLTLTNAGS QATTVTIARCPYTQKGPWQIELPAGGRHQQAFATKSSGGWYDLSLQGAQGWQRRLAGRLENGDHSVSDPLMGKA
Specific function: Hydrolyzes phosphatidylserine as well as phosphatidylcholine [H]
COG id: COG3511
COG function: function code M; Phospholipase C
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial phospholipase C family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007312 - InterPro: IPR008475 - InterPro: IPR017767 - InterPro: IPR006311 [H]
Pfam domain/function: PF05506 DUF756; PF04185 Phosphoesterase [H]
EC number: =3.1.4.3 [H]
Molecular weight: Translated: 79452; Mature: 79320
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFSRREILRAAAIGSAFSLLPASIRKALAIPANNRTGTLNDVEHVVILMQENRSFDHY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCHHHH FGTLPGVRGFSDRITIPLPGGRHVWQQQGEHRLVLPYHLDSKLGNAQRVSGTPHSWVDEQ HCCCCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCC SAWDNGRMSAWPTYKTPTSMGYYRRHELPFQFALAETFTLCDAYHCSIHAGTNTNRLFHW CCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHCEEEEEEECCCCCCEEEEE TGTNGPTAAEVAVVVNEWDSPGPAEVGYQWQTYPERLEAGGVSWKVYQFLPDNFTDNPLA ECCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCHHH GFRQYRAASVKVGNPAQPPKDFTAFVPYSDELNVEAPLYKGNGNTLPAADGNDLDAMLTG HHHHHHHEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH FRNDVQQGKLPQVSWIIAPAAYSEHPGPSSPVQGGWFTQEILNALTDNPEVWSKTVLLVN HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEE YDENDGFFDHMPSPSAPSLREDGSFAGKSTVPFDSEIFQHVAPPGSQEQPPPDGRIYGPG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCC PRVPMLVLSPWSRGGWVNSQVFDHTSVLQFLEKRFQVHEPNISAWRRAVCGDLTSAFNFV CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC DPNEETLPRLPTTSRHAADSLRQRQEQLPQVPLPPVNRQQLPHQSRLARPSRALPYQLHV CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCEEEEE EASSNPEQKMLTLNLYNTGEQGVVFHVYDLLSLEQIPRRYTVEAGKAVSDNWLTADRYHL ECCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEECCCCCCCCCCEEECCEEE WLLGPNGFHRELGGSVLQPQPEVQLTPQGDRLSLTLTNAGSQATTVTIARCPYTQKGPWQ EEECCCCHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEE IELPAGGRHQQAFATKSSGGWYDLSLQGAQGWQRRLAGRLENGDHSVSDPLMGKA EECCCCCCCCHHEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDFSRREILRAAAIGSAFSLLPASIRKALAIPANNRTGTLNDVEHVVILMQENRSFDHY CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEEEEECCCCHHHH FGTLPGVRGFSDRITIPLPGGRHVWQQQGEHRLVLPYHLDSKLGNAQRVSGTPHSWVDEQ HCCCCCCCCCCCEEEEECCCCCHHHHHCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCC SAWDNGRMSAWPTYKTPTSMGYYRRHELPFQFALAETFTLCDAYHCSIHAGTNTNRLFHW CCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEHHHHHHHHHCEEEEEEECCCCCCEEEEE TGTNGPTAAEVAVVVNEWDSPGPAEVGYQWQTYPERLEAGGVSWKVYQFLPDNFTDNPLA ECCCCCCCEEEEEEEECCCCCCCHHCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCHHH GFRQYRAASVKVGNPAQPPKDFTAFVPYSDELNVEAPLYKGNGNTLPAADGNDLDAMLTG HHHHHHHEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH FRNDVQQGKLPQVSWIIAPAAYSEHPGPSSPVQGGWFTQEILNALTDNPEVWSKTVLLVN HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEE YDENDGFFDHMPSPSAPSLREDGSFAGKSTVPFDSEIFQHVAPPGSQEQPPPDGRIYGPG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCC PRVPMLVLSPWSRGGWVNSQVFDHTSVLQFLEKRFQVHEPNISAWRRAVCGDLTSAFNFV CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCC DPNEETLPRLPTTSRHAADSLRQRQEQLPQVPLPPVNRQQLPHQSRLARPSRALPYQLHV CCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHCCCCCCCCEEEEE EASSNPEQKMLTLNLYNTGEQGVVFHVYDLLSLEQIPRRYTVEAGKAVSDNWLTADRYHL ECCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHCCCEEEECCCCCCCCCCEEECCEEE WLLGPNGFHRELGGSVLQPQPEVQLTPQGDRLSLTLTNAGSQATTVTIARCPYTQKGPWQ EEECCCCHHHHHCCCCCCCCCCEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEE IELPAGGRHQQAFATKSSGGWYDLSLQGAQGWQRRLAGRLENGDHSVSDPLMGKA EECCCCCCCCHHEEECCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2120196; 10984043 [H]