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The map label for this gene is yggR [H]

Identifier: 157372263

GI number: 157372263

Start: 4470708

End: 4471730

Strand: Reverse

Name: yggR [H]

Synonym: Spro_4029

Alternate gene names: 157372263

Gene position: 4471730-4470708 (Counterclockwise)

Preceding gene: 157372270

Following gene: 157372256

Centisome position: 82.07

GC content: 58.55

Gene sequence:

>1023_bases
ATGGATATCGATGAATTCGTGGCCCTTAGTGTAAAGCATAATGCTTCCGATCTGCACCTTTGTACCGGTCATCGGCCGAT
GTTGCGCATTGATGGTGAACTTCAGCCGCTGGAAGGGGCGGAAATACTGAGCGAAGCCAGAATGCAACTGCTGTGCAACG
GCGTGCTGCAGCCGTTACAACGACAGCAGTTACAACAACAAGGGCAGTTGGATCTGGCGCTTTCGCTGCCGGGTGATATC
CGGTTGCGCGCCAATTTTTTTCTGCAAAACCTGGGCGTCTCCGTTGCATTGCGGCTGATAGCGGGCCAATGTCCGACTCT
GGCAGCATTGGCGGCGCCAGATATTATCCCTGCGTTGGTGCGACGTGAAGACGGCCTGATCCTGGTGACCGGCGCGACCG
GCAGCGGTAAATCCACCACCTTGGCGGCGATGATTGACGACATCAATCAGCACCAGCGGCGGCATATCCTCACGTTGGAA
GATCCGATTGAGTTTATCCACCGCAGCAGGCAGTGTTTGATTCAGCAGCGGGAGTTGGGGCGCGACAGCCACAGTTTTGA
CGACGCATTGCGTGCCGCACTGCGTGAAGATCCGGATGTGATCCTGTTGGGGGAGTTGCGCGATACCGCCACCATCCGCC
TTGCTCTGACCGCTGCAGAAACCGGCCACCTGGTACTGGCCACGCTGCATACCCGCAGTGCGCCGCAGGCGGTGGATCGG
CTGGTGGATGTTTTTCCGGCGGAAGAAAAGCCCTATGTACGCGCCCAACTGGCCGGGAGCCTGCAGGCGGTGATTGCACA
AAAGCTGTTAAGTCGGCCCGGAGGCGGCAGGGTGGCGATTTTTGAGGTGCTGACGGCAACGGCGGCGGTCAGCAGCATGA
TCCGTGAAGGCAAAACCCACCAGTTGGCCAACGTGCTGCAAACCGGCGGGCAGTCCGGCATGCAGACCTTTGAACAGGGC
CTGCAGCAGCGGATCAGCACCGGCTTACTTGGTGGAGGGCAAGACACTCAGAATAGGGATTAA

Upstream 100 bases:

>100_bases
TCTGGAGCGCGTGCGCAGCCTTGAGCGGCCGCGGCAATGCGGTTTCTGACATCCTGCAGATTCTGTTGGATAGTGCTCAT
TGTTGACCCAGGAGATTGAT

Downstream 100 bases:

>100_bases
CCCAGCTGCCGCTCAAACCAGCTTTCCAAAATAACCACCGCCGAGGCGGAGTCCACGCTGCCCTTGTCCAGCGCGCGGAA
GCCGCCACGGTCGAACAGGT

Product: twitching motility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MDIDEFVALSVKHNASDLHLCTGHRPMLRIDGELQPLEGAEILSEARMQLLCNGVLQPLQRQQLQQQGQLDLALSLPGDI
RLRANFFLQNLGVSVALRLIAGQCPTLAALAAPDIIPALVRREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLE
DPIEFIHRSRQCLIQQRELGRDSHSFDDALRAALREDPDVILLGELRDTATIRLALTAAETGHLVLATLHTRSAPQAVDR
LVDVFPAEEKPYVRAQLAGSLQAVIAQKLLSRPGGGRVAIFEVLTATAAVSSMIREGKTHQLANVLQTGGQSGMQTFEQG
LQQRISTGLLGGGQDTQNRD

Sequences:

>Translated_340_residues
MDIDEFVALSVKHNASDLHLCTGHRPMLRIDGELQPLEGAEILSEARMQLLCNGVLQPLQRQQLQQQGQLDLALSLPGDI
RLRANFFLQNLGVSVALRLIAGQCPTLAALAAPDIIPALVRREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLE
DPIEFIHRSRQCLIQQRELGRDSHSFDDALRAALREDPDVILLGELRDTATIRLALTAAETGHLVLATLHTRSAPQAVDR
LVDVFPAEEKPYVRAQLAGSLQAVIAQKLLSRPGGGRVAIFEVLTATAAVSSMIREGKTHQLANVLQTGGQSGMQTFEQG
LQQRISTGLLGGGQDTQNRD
>Mature_340_residues
MDIDEFVALSVKHNASDLHLCTGHRPMLRIDGELQPLEGAEILSEARMQLLCNGVLQPLQRQQLQQQGQLDLALSLPGDI
RLRANFFLQNLGVSVALRLIAGQCPTLAALAAPDIIPALVRREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLE
DPIEFIHRSRQCLIQQRELGRDSHSFDDALRAALREDPDVILLGELRDTATIRLALTAAETGHLVLATLHTRSAPQAVDR
LVDVFPAEEKPYVRAQLAGSLQAVIAQKLLSRPGGGRVAIFEVLTATAAVSSMIREGKTHQLANVLQTGGQSGMQTFEQG
LQQRISTGLLGGGQDTQNRD

Specific function: Unknown

COG id: COG2805

COG function: function code NU; Tfp pilus assembly protein, pilus retraction ATPase PilT

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI87082188, Length=332, Percent_Identity=58.433734939759, Blast_Score=361, Evalue=1e-101,
Organism=Escherichia coli, GI1789723, Length=283, Percent_Identity=36.0424028268551, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1786296, Length=370, Percent_Identity=31.6216216216216, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR006321
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 36896; Mature: 36896

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00662 T2SP_E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDEFVALSVKHNASDLHLCTGHRPMLRIDGELQPLEGAEILSEARMQLLCNGVLQPLQ
CCHHHHEEEEEECCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQQLQQQGQLDLALSLPGDIRLRANFFLQNLGVSVALRLIAGQCPTLAALAAPDIIPALV
HHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHH
RREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLEDPIEFIHRSRQCLIQQRELG
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCC
RDSHSFDDALRAALREDPDVILLGELRDTATIRLALTAAETGHLVLATLHTRSAPQAVDR
CCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHH
LVDVFPAEEKPYVRAQLAGSLQAVIAQKLLSRPGGGRVAIFEVLTATAAVSSMIREGKTH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCHH
QLANVLQTGGQSGMQTFEQGLQQRISTGLLGGGQDTQNRD
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDIDEFVALSVKHNASDLHLCTGHRPMLRIDGELQPLEGAEILSEARMQLLCNGVLQPLQ
CCHHHHEEEEEECCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RQQLQQQGQLDLALSLPGDIRLRANFFLQNLGVSVALRLIAGQCPTLAALAAPDIIPALV
HHHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHH
RREDGLILVTGATGSGKSTTLAAMIDDINQHQRRHILTLEDPIEFIHRSRQCLIQQRELG
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHCC
RDSHSFDDALRAALREDPDVILLGELRDTATIRLALTAAETGHLVLATLHTRSAPQAVDR
CCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHH
LVDVFPAEEKPYVRAQLAGSLQAVIAQKLLSRPGGGRVAIFEVLTATAAVSSMIREGKTH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCHH
QLANVLQTGGQSGMQTFEQGLQQRISTGLLGGGQDTQNRD
HHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]