| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is aceE [H]
Identifier: 157372245
GI number: 157372245
Start: 4448635
End: 4451298
Strand: Reverse
Name: aceE [H]
Synonym: Spro_4011
Alternate gene names: 157372245
Gene position: 4451298-4448635 (Counterclockwise)
Preceding gene: 157372246
Following gene: 157372244
Centisome position: 81.69
GC content: 54.17
Gene sequence:
>2664_bases ATGTCAGAACGTTTAAACAATGACGTGGATCCGATCGAAACCCGCGACTGGCTGCAGGCGATCGAATCGGTCATCCGTGA AGAGGGTGTTGAGCGAGCTCAGTTTCTGATTGATCAGGTTCTGGGTGAAGCCCGTAAAGGCGGTGTTAGCGTTGCAGCCG GTGCTGCGGCTCACAACTACGTCAACACCATCGCGGTGGAAGACGAACCTGCTTACCCTGGTAACCTGGATCTTGAGCGT CGTATCCGCAGCGCTATTCGCTGGAATGCGGTAATGACCGTTCTTCGTGCTTCCAAAAAAGATCTGGATCTGGGCGGCCA CATGGCTTCCTTCCAATCTTCTGCGACCTTCTATGAAGTCTGCTTCAACCACTTCTTCCGTGCACGCACCGAACAAGATG GCGGCGATCTGGTTTACTTCCAGGGCCACATCTCTCCGGGCGTTTACGCACGTGCCTTCCTTGAAGGCCGCTTGACCGAA GACCAAATGAATAACTTCCGTCAGGAAGTTCACGGTAAAGGCCTGTCGTCTTACCCGCATCCTAAATTGATGCCGGAATT CTGGCAGTTCCCGACCGTTTCCATGGGCCTGGGCCCAATCAGCGCCATCTATCAAGCGAAGTTCCTGAAATATCTGGAAC ACCGTGGCCTGAAGAACACCTCTGCTCAAACCGTTTACGCCTTCCTGGGCGACGGCGAGATGGATGAGCCGGAATCCAAG GGCGCGATCACCATCGCTACCCGTGAGAAGCTGGACAACCTGGTATTCGTCATCAACTGCAACCTGCAGCGTCTGGACGG CCCGGTCACCGGTAACGGCAAGATCATCAATGAGCTGGAAGGCATCTTCGCGGGCGCAGGCTGGCAGGTACTGAAAGTGA TCTGGGGTGGTCGTTGGGATGAACTGCTGCGTAAAGATACCAGCGGCAAGCTGATCCAACTGATGAACGAAACCCTGGAC GGCGACTACCAGACCTTCAAATCCAAAGACGGCGCTTACGTACGTGAGCACTTCTTCGGTCGCTTCCCGGAAACTGCTGC GTTGGTCAAAGATATGACCGACGAAGAGATCTGGGCGCTGAACCGTGGCGGTCACGATCCGAAGAAAGTCTTTGCTGCAC TGAAAAAAGCGCAGGACACCCAAGGCAAACCAACCGTTATCCTGGCCCATACCATCAAAGGTTACGGCATGGGTGAAACC GCGGAAGGTAAAAACATTGCTCACCAGGTGAAGAAAATGAACATGGAAGGGGTTCACCACTTCCGCGATCGTTTCAACGT GCCGGTTGCCGATGCTGACATCGAAAAACTGCCGTACGTCACCTTCGAGAAAGATTCCGAAGAGTACAAATATCTGCACG AACGTCGTCAGGCGCTGGCAGGCTATGTGCCTACCCGTATGCCGAAGTTCACCGAGAAGCTGGAAATGCCGGCTCTGGCA GACTTCAGCTCCTTGCTGGAAGAGCAGAACAAAGAAATTTCTACCACCATCGCCTTCGTGCGTGCCCTGAACGTGATGCT GAAGAACAAGTCGATCAAAGATCGCCTGGTTCCAATCATTGCCGACGAAGCTCGTACCTTCGGCATGGAAGGTCTGTTCC GTCAGATCGGTATCTACAGCCCGAACGGCCAGCAGTACACTCCGCAGGACCGTGAGCAGGTTGCTTACTACAAAGAAGAC GAGAAAGGCCAGATCCTGCAGGAAGGCATCAACGAACTGGGTGCAGCCTCTTCATGGTTGGCCGCAGCGACTTCCTACAG CACCAACGATCTGCCAATGATCCCGTTCTACATCTACTATTCGATGTTCGGTTTCCAGCGTATCGGTGACCTGTGCTGGG CAGCAGGCGACCAACAGGCGCGCGGCTTCCTGGTAGGCGGTACTTCAGGCCGTACCACCCTGAACGGTGAAGGTCTGCAG CACGAAGACGGCCACAGCCACATCCAGTCCCTGACTATTCCTAACTGTATCTCTTACGATCCAGCTTACGCGTACGAAGT GGCAGTGATCATGCACGACGGTCTGGTTCGCATGTACGGTGACGCGCAAGAAAACGTCTACTACTACATCACCACGCTGA ACGAAAACTACCACATGCCGGCTATGCCGCAGGGTGCAGAAGAAGGTATCCGTAAAGGTATCTACAAGCTGGACACTCTG GCAGGCAGCAAAGGCAAGGTTCAGTTGCTGGGTTCAGGTTCTATCCTGCGTCACGTTCGTGAAGCGGCGAAGATCCTGGC TGACGATTACGGCGTGGGTTCTGACATCTACAGCGTGACTTCCTTCACTGAACTGGCGCGTGATGGCCAGGATTGTGAGC GTTGGAACATGCTGCACCCAACCGAAACTCCGCGCGTACCTTACATCGCTCAGGTGATGAACGAAGCGCCGGCGGTTGCG TCTACCGACTACATGAAGCTGTTCGCAGAACAGGTTCGTACTTACGTTCCAGCCAGCGACTATCGCGTTCTGGGTACTGA CGGCTTCGGTCGTTCAGACAGCCGCGAAAACCTGCGCCACCACTTTGAAGTTGATGCTTCTTACGTTGTGGTTGCTGCAC TGGGTGAACTGGCTAAACGCGGTGAAATCGAAGCTTCTGTGGTAGCTGATGCGATTAAGAAATTCGACATCAACCCAGAA AAAGTTAACCCGCGTCTGGCATAA
Upstream 100 bases:
>100_bases AGCGGCAACTAAACTGATGGGCCTGTCTTCGTGTGTTTTGCCTCAGAACACAGGAAGACAGGCTCCAAAACAAACCATTA GACAGATAAGGAATACCACC
Downstream 100 bases:
>100_bases GAGGTACAGAAGAATGTCTATCGAAATTAAAGTACCGGACATCGGTGCAGACGAAGTGGAAATCACCGAAATTCTGGTGA AAGTGGGCGATAAAGTTGAA
Product: pyruvate dehydrogenase subunit E1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 887; Mature: 886
Protein sequence:
>887_residues MSERLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLGEARKGGVSVAAGAAAHNYVNTIAVEDEPAYPGNLDLER RIRSAIRWNAVMTVLRASKKDLDLGGHMASFQSSATFYEVCFNHFFRARTEQDGGDLVYFQGHISPGVYARAFLEGRLTE DQMNNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPISAIYQAKFLKYLEHRGLKNTSAQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWQVLKVIWGGRWDELLRKDTSGKLIQLMNETLD GDYQTFKSKDGAYVREHFFGRFPETAALVKDMTDEEIWALNRGGHDPKKVFAALKKAQDTQGKPTVILAHTIKGYGMGET AEGKNIAHQVKKMNMEGVHHFRDRFNVPVADADIEKLPYVTFEKDSEEYKYLHERRQALAGYVPTRMPKFTEKLEMPALA DFSSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKED EKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQ HEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLVRMYGDAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLDTL AGSKGKVQLLGSGSILRHVREAAKILADDYGVGSDIYSVTSFTELARDGQDCERWNMLHPTETPRVPYIAQVMNEAPAVA STDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPE KVNPRLA
Sequences:
>Translated_887_residues MSERLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLGEARKGGVSVAAGAAAHNYVNTIAVEDEPAYPGNLDLER RIRSAIRWNAVMTVLRASKKDLDLGGHMASFQSSATFYEVCFNHFFRARTEQDGGDLVYFQGHISPGVYARAFLEGRLTE DQMNNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPISAIYQAKFLKYLEHRGLKNTSAQTVYAFLGDGEMDEPESK GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWQVLKVIWGGRWDELLRKDTSGKLIQLMNETLD GDYQTFKSKDGAYVREHFFGRFPETAALVKDMTDEEIWALNRGGHDPKKVFAALKKAQDTQGKPTVILAHTIKGYGMGET AEGKNIAHQVKKMNMEGVHHFRDRFNVPVADADIEKLPYVTFEKDSEEYKYLHERRQALAGYVPTRMPKFTEKLEMPALA DFSSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKED EKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQ HEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLVRMYGDAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLDTL AGSKGKVQLLGSGSILRHVREAAKILADDYGVGSDIYSVTSFTELARDGQDCERWNMLHPTETPRVPYIAQVMNEAPAVA STDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPE KVNPRLA >Mature_886_residues SERLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLGEARKGGVSVAAGAAAHNYVNTIAVEDEPAYPGNLDLERR IRSAIRWNAVMTVLRASKKDLDLGGHMASFQSSATFYEVCFNHFFRARTEQDGGDLVYFQGHISPGVYARAFLEGRLTED QMNNFRQEVHGKGLSSYPHPKLMPEFWQFPTVSMGLGPISAIYQAKFLKYLEHRGLKNTSAQTVYAFLGDGEMDEPESKG AITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWQVLKVIWGGRWDELLRKDTSGKLIQLMNETLDG DYQTFKSKDGAYVREHFFGRFPETAALVKDMTDEEIWALNRGGHDPKKVFAALKKAQDTQGKPTVILAHTIKGYGMGETA EGKNIAHQVKKMNMEGVHHFRDRFNVPVADADIEKLPYVTFEKDSEEYKYLHERRQALAGYVPTRMPKFTEKLEMPALAD FSSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE KGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQH EDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLVRMYGDAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLDTLA GSKGKVQLLGSGSILRHVREAAKILADDYGVGSDIYSVTSFTELARDGQDCERWNMLHPTETPRVPYIAQVMNEAPAVAS TDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPEK VNPRLA
Specific function: The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components:pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydroge
COG id: COG2609
COG function: function code C; Pyruvate dehydrogenase complex, dehydrogenase (E1) component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786304, Length=887, Percent_Identity=89.0642615558061, Blast_Score=1674, Evalue=0.0,
Paralogues:
None
Copy number: 1140 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 400 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004660 - InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005474 [H]
Pfam domain/function: PF00456 Transketolase_N [H]
EC number: =1.2.4.1 [H]
Molecular weight: Translated: 99311; Mature: 99180
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLGEARKGGVSVAAGAAAHNY CCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHC VNTIAVEDEPAYPGNLDLERRIRSAIRWNAVMTVLRASKKDLDLGGHMASFQSSATFYEV CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH CFNHFFRARTEQDGGDLVYFQGHISPGVYARAFLEGRLTEDQMNNFRQEVHGKGLSSYPH HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC PKLMPEFWQFPTVSMGLGPISAIYQAKFLKYLEHRGLKNTSAQTVYAFLGDGEMDEPESK CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWQVLKVIWGGRWD CCEEEEEHHHHCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHH ELLRKDTSGKLIQLMNETLDGDYQTFKSKDGAYVREHFFGRFPETAALVKDMTDEEIWAL HHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCHHEEE NRGGHDPKKVFAALKKAQDTQGKPTVILAHTIKGYGMGETAEGKNIAHQVKKMNMEGVHH CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHH FRDRFNVPVADADIEKLPYVTFEKDSEEYKYLHERRQALAGYVPTRMPKFTEKLEMPALA HHHHCCCCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHH DFSSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCC PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYY CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH SMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCC PAYAYEVAVIMHDGLVRMYGDAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLDTL CCHHEEEEEEECCCHHEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH AGSKGKVQLLGSGSILRHVREAAKILADDYGVGSDIYSVTSFTELARDGQDCERWNMLHP CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCC TETPRVPYIAQVMNEAPAVASTDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRH CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHH HFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPEKVNPRLA HCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCC >Mature Secondary Structure SERLNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLGEARKGGVSVAAGAAAHNY CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHC VNTIAVEDEPAYPGNLDLERRIRSAIRWNAVMTVLRASKKDLDLGGHMASFQSSATFYEV CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHH CFNHFFRARTEQDGGDLVYFQGHISPGVYARAFLEGRLTEDQMNNFRQEVHGKGLSSYPH HHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCC PKLMPEFWQFPTVSMGLGPISAIYQAKFLKYLEHRGLKNTSAQTVYAFLGDGEMDEPESK CCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC GAITIATREKLDNLVFVINCNLQRLDGPVTGNGKIINELEGIFAGAGWQVLKVIWGGRWD CCEEEEEHHHHCCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHH ELLRKDTSGKLIQLMNETLDGDYQTFKSKDGAYVREHFFGRFPETAALVKDMTDEEIWAL HHHHCCCCCHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCHHEEE NRGGHDPKKVFAALKKAQDTQGKPTVILAHTIKGYGMGETAEGKNIAHQVKKMNMEGVHH CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHH FRDRFNVPVADADIEKLPYVTFEKDSEEYKYLHERRQALAGYVPTRMPKFTEKLEMPALA HHHHCCCCCCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHH DFSSLLEEQNKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYS HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCC PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYY CCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHH SMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCCCC PAYAYEVAVIMHDGLVRMYGDAQENVYYYITTLNENYHMPAMPQGAEEGIRKGIYKLDTL CCHHEEEEEEECCCHHEECCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH AGSKGKVQLLGSGSILRHVREAAKILADDYGVGSDIYSVTSFTELARDGQDCERWNMLHP CCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCC TETPRVPYIAQVMNEAPAVASTDYMKLFAEQVRTYVPASDYRVLGTDGFGRSDSRENLRH CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHH HFEVDASYVVVAALGELAKRGEIEASVVADAIKKFDINPEKVNPRLA HCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]