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The map label for this gene is yadH [H]

Identifier: 157372229

GI number: 157372229

Start: 4430336

End: 4431106

Strand: Reverse

Name: yadH [H]

Synonym: Spro_3995

Alternate gene names: 157372229

Gene position: 4431106-4430336 (Counterclockwise)

Preceding gene: 157372230

Following gene: 157372228

Centisome position: 81.32

GC content: 57.2

Gene sequence:

>771_bases
ATGATGCGTTTGTATTGGGTGGCCTTGCAGAGCATCTGGGCTAAAGAGATCAACCGTTTTGCCCGCATCTGGATCCAGAC
GCTGGTGCCGCCGGTGATCACCATGACGCTGTATTTCATCATCTTCGGCAACCTGATAGGTTCACGCATTGGCGAGATGC
ACGGTTTTGATTACATGCAGTTTATCGTCCCCGGTCTGATTATGATGGCGGTGATCACCAACTCGTATGCCAACGTGGCG
TCATCGTTCTTCAGCGCCAAATTTCAGCGCAACATTGAAGAGCTGCTGGTGGCCCCGGTACCGACGCACGTGGTGATTGC
CGGTTACGTCGGTGGTGGCGTAGCGCGCGGTATTTGCGTCGGCGTGCTGGTGACCGTGATTTCGCTGTTCTTCGTGCCGT
TGCAGGTGCATGCCTGGTGGGTGATTGTCGCTACGCTGCTGCTGACGGCGATTTTGTTCTCGCTGGCGGGGCTGATCAAC
GCGGTGTTTGCCACCACCTTTGACGACATCAGCCTGATCCCGACCTTCGTGCTGACGCCGCTGACCTATCTGGGTGGGGT
GTTTTACTCGCTGACGCTGCTGCCGCCGTTCTGGCAGGCGGTGTCCAAACTGAACCCGATTGTCTACATGATCAGCGGAT
TTCGCTATGGCTTCCTGGGCATCAGCGACGTGCCGTTGACGCTGACCATGACGGTGCTGGTGGCGTTCATTGCGGTGTTC
TACCTGCTGTCCTGGTACCTGATTGAGCGCGGTCGCGGTCTGCGTACCTGA

Upstream 100 bases:

>100_bases
AGCTCAGTGCGCAGGGCGTTCAGGTACTGAGCATGCGTAACAAGGCCAACCGGCTGGAAGAGCTGTTTGTCACTCTGGTT
AACGGTAATGGAGAAAAAGC

Downstream 100 bases:

>100_bases
TTAACCAGCGTCCCCGGACATCGCGTACGGGGACGCTTTACCTGACCTGAAGCAAGTAGCCTGTAAATCAATAGAATTGC
TCAAATAACCCCTTTCTCCC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMRLYWVALQSIWAKEINRFARIWIQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFDYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVVIAGYVGGGVARGICVGVLVTVISLFFVPLQVHAWWVIVATLLLTAILFSLAGLIN
AVFATTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQAVSKLNPIVYMISGFRYGFLGISDVPLTLTMTVLVAFIAVF
YLLSWYLIERGRGLRT

Sequences:

>Translated_256_residues
MMRLYWVALQSIWAKEINRFARIWIQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFDYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVVIAGYVGGGVARGICVGVLVTVISLFFVPLQVHAWWVIVATLLLTAILFSLAGLIN
AVFATTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQAVSKLNPIVYMISGFRYGFLGISDVPLTLTMTVLVAFIAVF
YLLSWYLIERGRGLRT
>Mature_256_residues
MMRLYWVALQSIWAKEINRFARIWIQTLVPPVITMTLYFIIFGNLIGSRIGEMHGFDYMQFIVPGLIMMAVITNSYANVA
SSFFSAKFQRNIEELLVAPVPTHVVIAGYVGGGVARGICVGVLVTVISLFFVPLQVHAWWVIVATLLLTAILFSLAGLIN
AVFATTFDDISLIPTFVLTPLTYLGGVFYSLTLLPPFWQAVSKLNPIVYMISGFRYGFLGISDVPLTLTMTVLVAFIAVF
YLLSWYLIERGRGLRT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=82.8125, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28566; Mature: 28566

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]