| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is queF [H]
Identifier: 157372035
GI number: 157372035
Start: 4200319
End: 4201164
Strand: Direct
Name: queF [H]
Synonym: Spro_3800
Alternate gene names: 157372035
Gene position: 4200319-4201164 (Clockwise)
Preceding gene: 157372033
Following gene: 157372036
Centisome position: 77.09
GC content: 56.26
Gene sequence:
>846_bases ATGTCCTCCTACCAAGACCATCAAGCCCTGTCGGCACTGACGCTGGGCAAAGCCACCGCGTATCGCGACCATTACGACGC CACGCTGTTGCAGGCGGTACCGCGCAGTATGAACCGCGAGCCGCTGGGCTTGTATCCGGACAGCCTGCCGTTCCACGGGG CCGATATCTGGACGCTGTACGAACTCTCCTGGCTGAACGACAACGGCTTGCCGCAGGTGGCAGTTGGAGAGATAAGCCTG ACTGCCGACAGCATCAATCTGATTGAGTCCAAGAGCTTCAAACTTTATCTCAACAGTTTCAACCAAACGCCTTTCAGCGA CTGGGAGACGGTGCGCAATACCTTGCAACGCGATCTGTCTGCCTGCGCTCAGGGCGAGGTCAGCGTCTCATTGTTCCGCG TAGATCAGCTGGAAGGCAGCCCGATCGCCCGGTTGGACGGCGAATGCATCGATAACCAGGACATACGTATCGATAACTAC GAGTTCAATGCCGATTATCTGCAAAATGCCACCGGCCCCCTGCAGGTGGAAGAGCAGTTGGTCAGCCATCTGTTGAAGTC CAATTGCCTGATCACCAACCAGCCGGACTGGGGCTCGGTGCAAATTGCTTATCGTGGTGCGCAGATCGATCGCGAAGCGC TGCTGCGTTATCTGGTGTCTTTCCGTCATCACAATGAATTCCATGAACAATGTGTCGAACGCATCTTTAACGACCTGATG CGTTACTGTCAGCCGCAAAGCCTGACGGTATATGCGCGCTACACCCGTCGCGGCGGGTTGGACATCAATCCATGGCGCAG CAACACTGACTTTGTCCCGTCACATGGCCGTCTGGCACGCCAATAG
Upstream 100 bases:
>100_bases TAAATTCACGCAGGGCGTGCGGTACATCATGGTCCATATTTTTTCTCGCATACGGTAAACTGGCAACCATTGTACCTATC TATTACCAAGGTGACAGCAG
Downstream 100 bases:
>100_bases TGCGAAACAGTGCTCAACAACTGAGCTAACGAGCGGTTTGTATTGGTAAAAAACAGGGGACGGCGGTAAGGTTAAATCAG GAGCGCTGGGCATTCCGGCT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSSYQDHQALSALTLGKATAYRDHYDATLLQAVPRSMNREPLGLYPDSLPFHGADIWTLYELSWLNDNGLPQVAVGEISL TADSINLIESKSFKLYLNSFNQTPFSDWETVRNTLQRDLSACAQGEVSVSLFRVDQLEGSPIARLDGECIDNQDIRIDNY EFNADYLQNATGPLQVEEQLVSHLLKSNCLITNQPDWGSVQIAYRGAQIDREALLRYLVSFRHHNEFHEQCVERIFNDLM RYCQPQSLTVYARYTRRGGLDINPWRSNTDFVPSHGRLARQ
Sequences:
>Translated_281_residues MSSYQDHQALSALTLGKATAYRDHYDATLLQAVPRSMNREPLGLYPDSLPFHGADIWTLYELSWLNDNGLPQVAVGEISL TADSINLIESKSFKLYLNSFNQTPFSDWETVRNTLQRDLSACAQGEVSVSLFRVDQLEGSPIARLDGECIDNQDIRIDNY EFNADYLQNATGPLQVEEQLVSHLLKSNCLITNQPDWGSVQIAYRGAQIDREALLRYLVSFRHHNEFHEQCVERIFNDLM RYCQPQSLTVYARYTRRGGLDINPWRSNTDFVPSHGRLARQ >Mature_280_residues SSYQDHQALSALTLGKATAYRDHYDATLLQAVPRSMNREPLGLYPDSLPFHGADIWTLYELSWLNDNGLPQVAVGEISLT ADSINLIESKSFKLYLNSFNQTPFSDWETVRNTLQRDLSACAQGEVSVSLFRVDQLEGSPIARLDGECIDNQDIRIDNYE FNADYLQNATGPLQVEEQLVSHLLKSNCLITNQPDWGSVQIAYRGAQIDREALLRYLVSFRHHNEFHEQCVERIFNDLMR YCQPQSLTVYARYTRRGGLDINPWRSNTDFVPSHGRLARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=282, Percent_Identity=75.886524822695, Blast_Score=457, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 32136; Mature: 32005
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYQDHQALSALTLGKATAYRDHYDATLLQAVPRSMNREPLGLYPDSLPFHGADIWTLY CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE ELSWLNDNGLPQVAVGEISLTADSINLIESKSFKLYLNSFNQTPFSDWETVRNTLQRDLS EEEECCCCCCCEEEECEEEEECCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH ACAQGEVSVSLFRVDQLEGSPIARLDGECIDNQDIRIDNYEFNADYLQNATGPLQVEEQL HHHCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCEEEECEECCHHHHHCCCCCCHHHHHH VSHLLKSNCLITNQPDWGSVQIAYRGAQIDREALLRYLVSFRHHNEFHEQCVERIFNDLM HHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RYCQPQSLTVYARYTRRGGLDINPWRSNTDFVPSHGRLARQ HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSYQDHQALSALTLGKATAYRDHYDATLLQAVPRSMNREPLGLYPDSLPFHGADIWTLY CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE ELSWLNDNGLPQVAVGEISLTADSINLIESKSFKLYLNSFNQTPFSDWETVRNTLQRDLS EEEECCCCCCCEEEECEEEEECCCHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH ACAQGEVSVSLFRVDQLEGSPIARLDGECIDNQDIRIDNYEFNADYLQNATGPLQVEEQL HHHCCCCEEEEEEEECCCCCCCHHCCCCCCCCCCEEEECEECCHHHHHCCCCCCHHHHHH VSHLLKSNCLITNQPDWGSVQIAYRGAQIDREALLRYLVSFRHHNEFHEQCVERIFNDLM HHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH RYCQPQSLTVYARYTRRGGLDINPWRSNTDFVPSHGRLARQ HHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA